Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 AL732292.2-201ENST00000609649 430 ntBASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 NSUN5P1-202ENST00000421140 1535 ntBASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 NSUN5P2-203ENST00000457352 1529 ntBASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF1Q9BSM1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 NUS1P2-201ENST00000417358 873 ntBASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 AC091607.1-201ENST00000490318 1060 ntBASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 AC138028.4-201ENST00000564984 1845 ntBASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 IFNL4P1-201ENST00000607083 540 ntBASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 AC009154.2-201ENST00000621177 724 ntBASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCGF1Q9BSM1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 AC141586.5-201ENST00000624546 2050 ntBASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 PHGDH-209ENST00000641074 1780 ntBASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCGF1Q9BSM1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms