Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARID3AQ99856 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ARID3AQ99856 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARID3AQ99856 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ARID3AQ99856 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARID3AQ99856 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ARID3AQ99856 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.08■□□□□ 0.81
ARID3AQ99856 AC036111.1-201ENST00000533973 1582 ntBASIC20.08■□□□□ 0.81
ARID3AQ99856 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARID3AQ99856 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARID3AQ99856 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
ARID3AQ99856 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.08■□□□□ 0.81
ARID3AQ99856 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.08■□□□□ 0.81
ARID3AQ99856 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
ARID3AQ99856 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARID3AQ99856 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARID3AQ99856 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARID3AQ99856 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARID3AQ99856 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.08■□□□□ 0.81
ARID3AQ99856 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.08■□□□□ 0.81
ARID3AQ99856 MCCD1P1-208ENST00000445732 328 ntBASIC20.08■□□□□ 0.81
ARID3AQ99856 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.08■□□□□ 0.81
ARID3AQ99856 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ARID3AQ99856 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC20.08■□□□□ 0.8
ARID3AQ99856 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
ARID3AQ99856 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ARID3AQ99856 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ARID3AQ99856 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.8
ARID3AQ99856 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
ARID3AQ99856 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ARID3AQ99856 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ARID3AQ99856 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.08■□□□□ 0.8
ARID3AQ99856 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ARID3AQ99856 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ARID3AQ99856 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARID3AQ99856 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ARID3AQ99856 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARID3AQ99856 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARID3AQ99856 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARID3AQ99856 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARID3AQ99856 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARID3AQ99856 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ARID3AQ99856 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARID3AQ99856 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ARID3AQ99856 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
ARID3AQ99856 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARID3AQ99856 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARID3AQ99856 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARID3AQ99856 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.07■□□□□ 0.8
ARID3AQ99856 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ARID3AQ99856 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.07■□□□□ 0.8
ARID3AQ99856 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
ARID3AQ99856 ECEL1P3-201ENST00000427961 737 ntBASIC20.07■□□□□ 0.8
ARID3AQ99856 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARID3AQ99856 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.07■□□□□ 0.8
ARID3AQ99856 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.07■□□□□ 0.8
ARID3AQ99856 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.07■□□□□ 0.8
ARID3AQ99856 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.07■□□□□ 0.8
ARID3AQ99856 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.07■□□□□ 0.8
ARID3AQ99856 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.07■□□□□ 0.8
ARID3AQ99856 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ARID3AQ99856 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ARID3AQ99856 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARID3AQ99856 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.07■□□□□ 0.8
ARID3AQ99856 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARID3AQ99856 LINC01568-207ENST00000641790 1380 ntBASIC20.07■□□□□ 0.8
ARID3AQ99856 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARID3AQ99856 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARID3AQ99856 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARID3AQ99856 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARID3AQ99856 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.06■□□□□ 0.8
ARID3AQ99856 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARID3AQ99856 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARID3AQ99856 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.06■□□□□ 0.8
ARID3AQ99856 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.06■□□□□ 0.8
ARID3AQ99856 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ARID3AQ99856 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC20.06■□□□□ 0.8
ARID3AQ99856 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARID3AQ99856 FLJ16779-201ENST00000612722 7638 ntBASIC20.06■□□□□ 0.8
ARID3AQ99856 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.06■□□□□ 0.8
ARID3AQ99856 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
ARID3AQ99856 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARID3AQ99856 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARID3AQ99856 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
ARID3AQ99856 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.06■□□□□ 0.8
ARID3AQ99856 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ARID3AQ99856 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
ARID3AQ99856 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARID3AQ99856 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ARID3AQ99856 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARID3AQ99856 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ARID3AQ99856 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARID3AQ99856 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARID3AQ99856 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC20.06■□□□□ 0.8
ARID3AQ99856 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARID3AQ99856 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.06■□□□□ 0.8
ARID3AQ99856 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARID3AQ99856 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.06■□□□□ 0.8
ARID3AQ99856 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARID3AQ99856 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms