Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.26■□□□□ 0.35
NPAS2Q99743 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NPAS2Q99743 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAS2Q99743 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.26■□□□□ 0.35
NPAS2Q99743 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAS2Q99743 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 LINC01311-201ENST00000565162 1445 ntBASIC17.26■□□□□ 0.35
NPAS2Q99743 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAS2Q99743 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAS2Q99743 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAS2Q99743 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAS2Q99743 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.26■□□□□ 0.35
NPAS2Q99743 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
NPAS2Q99743 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.25■□□□□ 0.35
NPAS2Q99743 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NPAS2Q99743 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.25■□□□□ 0.35
NPAS2Q99743 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.25■□□□□ 0.35
NPAS2Q99743 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NPAS2Q99743 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.25■□□□□ 0.35
NPAS2Q99743 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.25■□□□□ 0.35
NPAS2Q99743 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.25■□□□□ 0.35
NPAS2Q99743 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.25■□□□□ 0.35
NPAS2Q99743 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.25■□□□□ 0.35
NPAS2Q99743 KRT18P23-201ENST00000435622 1283 ntBASIC17.25■□□□□ 0.35
NPAS2Q99743 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.25■□□□□ 0.35
NPAS2Q99743 ZNF444P1-201ENST00000559497 298 ntBASIC17.25■□□□□ 0.35
NPAS2Q99743 AL136038.3-201ENST00000561909 1096 ntBASIC17.25■□□□□ 0.35
NPAS2Q99743 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.25■□□□□ 0.35
NPAS2Q99743 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NPAS2Q99743 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.25■□□□□ 0.35
NPAS2Q99743 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
NPAS2Q99743 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NPAS2Q99743 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.25■□□□□ 0.35
NPAS2Q99743 AC116407.4-201ENST00000623319 1061 ntBASIC17.25■□□□□ 0.35
NPAS2Q99743 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.25■□□□□ 0.35
NPAS2Q99743 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NPAS2Q99743 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.25■□□□□ 0.35
NPAS2Q99743 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NPAS2Q99743 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.25■□□□□ 0.35
NPAS2Q99743 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS2Q99743 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.25■□□□□ 0.35
NPAS2Q99743 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS2Q99743 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS2Q99743 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS2Q99743 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NPAS2Q99743 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NPAS2Q99743 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS2Q99743 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS2Q99743 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS2Q99743 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS2Q99743 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NPAS2Q99743 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS2Q99743 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS2Q99743 HBZP1-201ENST00000354915 429 ntBASIC17.24■□□□□ 0.35
NPAS2Q99743 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS2Q99743 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS2Q99743 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAS2Q99743 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAS2Q99743 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS2Q99743 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.24■□□□□ 0.35
NPAS2Q99743 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
NPAS2Q99743 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
NPAS2Q99743 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms