Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LITAFQ99732 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC11.72□□□□□ -0.53
LITAFQ99732 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
LITAFQ99732 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC11.72□□□□□ -0.53
LITAFQ99732 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LITAFQ99732 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.72□□□□□ -0.53
LITAFQ99732 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC11.72□□□□□ -0.53
LITAFQ99732 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC11.72□□□□□ -0.53
LITAFQ99732 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC11.72□□□□□ -0.53
LITAFQ99732 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC11.72□□□□□ -0.53
LITAFQ99732 KRT16P5-201ENST00000455284 522 ntBASIC11.72□□□□□ -0.53
LITAFQ99732 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC11.72□□□□□ -0.53
LITAFQ99732 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC11.72□□□□□ -0.53
LITAFQ99732 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
LITAFQ99732 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC11.72□□□□□ -0.53
LITAFQ99732 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC11.72□□□□□ -0.53
LITAFQ99732 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC11.72□□□□□ -0.53
LITAFQ99732 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC11.72□□□□□ -0.53
LITAFQ99732 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LITAFQ99732 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC11.72□□□□□ -0.53
LITAFQ99732 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.72□□□□□ -0.53
LITAFQ99732 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC11.72□□□□□ -0.53
LITAFQ99732 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LITAFQ99732 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
LITAFQ99732 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
LITAFQ99732 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC11.71□□□□□ -0.53
LITAFQ99732 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 MED29-202ENST00000594368 1471 ntTSL 2 BASIC11.71□□□□□ -0.53
LITAFQ99732 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC11.71□□□□□ -0.53
LITAFQ99732 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC11.71□□□□□ -0.53
LITAFQ99732 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LITAFQ99732 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC11.71□□□□□ -0.53
LITAFQ99732 PPP1R14BP2-201ENST00000426284 444 ntBASIC11.71□□□□□ -0.53
LITAFQ99732 AC005104.2-201ENST00000427818 678 ntBASIC11.71□□□□□ -0.53
LITAFQ99732 KRT18P23-201ENST00000435622 1283 ntBASIC11.71□□□□□ -0.53
LITAFQ99732 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 FAM207BP-201ENST00000447172 505 ntBASIC11.71□□□□□ -0.53
LITAFQ99732 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC11.71□□□□□ -0.53
LITAFQ99732 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LITAFQ99732 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
LITAFQ99732 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC11.71□□□□□ -0.53
LITAFQ99732 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
LITAFQ99732 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC11.71□□□□□ -0.53
LITAFQ99732 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC11.71□□□□□ -0.53
LITAFQ99732 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC11.71□□□□□ -0.53
LITAFQ99732 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC11.71□□□□□ -0.53
LITAFQ99732 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC11.71□□□□□ -0.53
LITAFQ99732 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC11.71□□□□□ -0.53
LITAFQ99732 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 AC087623.3-201ENST00000607047 1098 ntBASIC11.71□□□□□ -0.53
LITAFQ99732 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC11.71□□□□□ -0.53
LITAFQ99732 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC11.71□□□□□ -0.53
LITAFQ99732 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LITAFQ99732 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LITAFQ99732 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LITAFQ99732 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LITAFQ99732 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC11.71□□□□□ -0.54
LITAFQ99732 AC093525.9-201ENST00000624961 1746 ntBASIC11.71□□□□□ -0.54
LITAFQ99732 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
LITAFQ99732 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LITAFQ99732 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms