Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 NAPSB-206ENST00000562112 1266 ntBASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 AL590326.2-201ENST00000625139 305 ntBASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CHAMP1Q96JM3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 AL049597.2-201ENST00000565575 961 ntBASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.41■□□□□ 0.86
CHAMP1Q96JM3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 MMP23A-201ENST00000234610 1017 ntBASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 HMGA1P5-201ENST00000412453 271 ntBASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 KRT18P65-201ENST00000439811 1286 ntBASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 NEK4P2-201ENST00000580004 1012 ntBASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHAMP1Q96JM3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms