Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 AC073592.5-201ENST00000624854 528 ntBASIC14.78□□□□□ -0.04
TIMD4Q96H15 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 ABALON-201ENST00000629058 1903 ntBASIC14.78□□□□□ -0.04
TIMD4Q96H15 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.78□□□□□ -0.04
TIMD4Q96H15 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMD4Q96H15 AC009949.1-201ENST00000623048 1830 ntBASIC14.78□□□□□ -0.04
TIMD4Q96H15 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMD4Q96H15 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TIMD4Q96H15 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TIMD4Q96H15 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TIMD4Q96H15 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TIMD4Q96H15 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.77□□□□□ -0.04
TIMD4Q96H15 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMD4Q96H15 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMD4Q96H15 AP000997.3-201ENST00000623333 2250 ntBASIC14.77□□□□□ -0.04
TIMD4Q96H15 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TIMD4Q96H15 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TIMD4Q96H15 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
TIMD4Q96H15 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMD4Q96H15 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TIMD4Q96H15 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.77□□□□□ -0.04
TIMD4Q96H15 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TIMD4Q96H15 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMD4Q96H15 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMD4Q96H15 HLA-A-201ENST00000376802 1334 ntBASIC14.77□□□□□ -0.04
TIMD4Q96H15 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMD4Q96H15 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.77□□□□□ -0.04
TIMD4Q96H15 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 MYCLP1-201ENST00000372451 1075 ntBASIC14.77□□□□□ -0.05
TIMD4Q96H15 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 KLF4P1-201ENST00000412782 1185 ntBASIC14.77□□□□□ -0.05
TIMD4Q96H15 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 AC018712.1-201ENST00000455767 687 ntBASIC14.77□□□□□ -0.05
TIMD4Q96H15 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TIMD4Q96H15 OR7E14P-202ENST00000530490 1290 ntBASIC14.77□□□□□ -0.05
TIMD4Q96H15 SART3-203ENST00000546611 1184 ntBASIC14.77□□□□□ -0.05
TIMD4Q96H15 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 AC120114.3-201ENST00000611923 658 ntBASIC14.77□□□□□ -0.05
TIMD4Q96H15 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.77□□□□□ -0.05
TIMD4Q96H15 AL022326.1-202ENST00000641533 845 ntBASIC14.77□□□□□ -0.05
TIMD4Q96H15 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TIMD4Q96H15 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 HLA-J-201ENST00000462773 1622 ntBASIC14.77□□□□□ -0.05
TIMD4Q96H15 AC079776.2-201ENST00000641154 1609 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms