Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 PMS2P1-201ENST00000431037 1228 ntBASIC15.91■□□□□ 0.14
LRRC46Q96FV0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 BNIP3P18-201ENST00000593976 575 ntBASIC15.91■□□□□ 0.14
LRRC46Q96FV0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.91■□□□□ 0.14
LRRC46Q96FV0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 HLA-A-201ENST00000376802 1334 ntBASIC15.91■□□□□ 0.14
LRRC46Q96FV0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC46Q96FV0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 AF238378.1-201ENST00000526806 358 ntBASIC15.9■□□□□ 0.14
LRRC46Q96FV0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 PCDHA12-202ENST00000613593 2588 ntBASIC15.9■□□□□ 0.14
LRRC46Q96FV0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC46Q96FV0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
LRRC46Q96FV0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 AC046158.3-201ENST00000624947 2558 ntBASIC15.89■□□□□ 0.13
LRRC46Q96FV0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC46Q96FV0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms