Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 ECEL1P3-201ENST00000427961 737 ntBASIC15.35■□□□□ 0.05
CPNE2Q96FN4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE2Q96FN4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.34■□□□□ 0.05
CPNE2Q96FN4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 FAM87A-204ENST00000613235 858 ntBASIC15.34■□□□□ 0.05
CPNE2Q96FN4 AC010947.1-201ENST00000623454 693 ntBASIC15.34■□□□□ 0.05
CPNE2Q96FN4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 LINC00602-201ENST00000629776 2065 ntBASIC15.34■□□□□ 0.05
CPNE2Q96FN4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE2Q96FN4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.33■□□□□ 0.05
CPNE2Q96FN4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.33■□□□□ 0.05
CPNE2Q96FN4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CPNE2Q96FN4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CPNE2Q96FN4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CPNE2Q96FN4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.33■□□□□ 0.05
CPNE2Q96FN4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CPNE2Q96FN4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 AC024563.2-201ENST00000603282 481 ntBASIC15.33■□□□□ 0.04
CPNE2Q96FN4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 AL031432.5-201ENST00000641059 760 ntBASIC15.33■□□□□ 0.04
CPNE2Q96FN4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 KRT18P22-201ENST00000402024 1347 ntBASIC15.33■□□□□ 0.04
CPNE2Q96FN4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 CICP6-201ENST00000457191 2729 ntBASIC15.33■□□□□ 0.04
CPNE2Q96FN4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE2Q96FN4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms