Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTP4Q96DX8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.93■□□□□ 0.46
RTP4Q96DX8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.93■□□□□ 0.46
RTP4Q96DX8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RTP4Q96DX8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.93■□□□□ 0.46
RTP4Q96DX8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 AL049757.1-201ENST00000616842 1596 ntBASIC17.93■□□□□ 0.46
RTP4Q96DX8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.93■□□□□ 0.46
RTP4Q96DX8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.93■□□□□ 0.46
RTP4Q96DX8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.93■□□□□ 0.46
RTP4Q96DX8 AC246785.2-201ENST00000432512 513 ntBASIC17.93■□□□□ 0.46
RTP4Q96DX8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.93■□□□□ 0.46
RTP4Q96DX8 DUSP5P1-201ENST00000441325 1139 ntBASIC17.93■□□□□ 0.46
RTP4Q96DX8 KRT8P26-201ENST00000534154 1276 ntBASIC17.93■□□□□ 0.46
RTP4Q96DX8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.93■□□□□ 0.46
RTP4Q96DX8 AL121894.2-201ENST00000602977 491 ntBASIC17.93■□□□□ 0.46
RTP4Q96DX8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.93■□□□□ 0.46
RTP4Q96DX8 AC124864.1-201ENST00000623408 392 ntBASIC17.93■□□□□ 0.46
RTP4Q96DX8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.93■□□□□ 0.46
RTP4Q96DX8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RTP4Q96DX8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.93■□□□□ 0.46
RTP4Q96DX8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RTP4Q96DX8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RTP4Q96DX8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTP4Q96DX8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RTP4Q96DX8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RTP4Q96DX8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RTP4Q96DX8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RTP4Q96DX8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.92■□□□□ 0.46
RTP4Q96DX8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.92■□□□□ 0.46
RTP4Q96DX8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.92■□□□□ 0.46
RTP4Q96DX8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.92■□□□□ 0.46
RTP4Q96DX8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.92■□□□□ 0.46
RTP4Q96DX8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.92■□□□□ 0.46
RTP4Q96DX8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RTP4Q96DX8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RTP4Q96DX8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RTP4Q96DX8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTP4Q96DX8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.91■□□□□ 0.46
RTP4Q96DX8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTP4Q96DX8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTP4Q96DX8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
RTP4Q96DX8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RTP4Q96DX8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTP4Q96DX8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.91■□□□□ 0.46
RTP4Q96DX8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
RTP4Q96DX8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTP4Q96DX8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RTP4Q96DX8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTP4Q96DX8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTP4Q96DX8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTP4Q96DX8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTP4Q96DX8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTP4Q96DX8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RTP4Q96DX8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.91■□□□□ 0.46
RTP4Q96DX8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.91■□□□□ 0.46
RTP4Q96DX8 IGHV3-52-201ENST00000519770 353 ntBASIC17.91■□□□□ 0.46
RTP4Q96DX8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTP4Q96DX8 AC109462.3-201ENST00000573934 613 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms