Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.3■□□□□ 0.2
CTHRC1Q96CG8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CTHRC1Q96CG8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTHRC1Q96CG8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTHRC1Q96CG8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTHRC1Q96CG8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTHRC1Q96CG8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CTHRC1Q96CG8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.3■□□□□ 0.2
CTHRC1Q96CG8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CTHRC1Q96CG8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTHRC1Q96CG8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTHRC1Q96CG8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTHRC1Q96CG8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 AP005117.1-201ENST00000584346 1413 ntBASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 SIGLEC16-201ENST00000599858 1437 ntBASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 STK19B-204ENST00000512515 211 ntBASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CTHRC1Q96CG8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 AL023806.1-201ENST00000603994 1649 ntBASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 KLF4P1-201ENST00000412782 1185 ntBASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 AC091304.2-201ENST00000564639 760 ntBASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 AP001269.4-201ENST00000609611 512 ntBASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 AC012313.10-201ENST00000623509 926 ntBASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 AC108860.2-201ENST00000562760 2183 ntBASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTHRC1Q96CG8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 SPDYE21P-201ENST00000413323 827 ntBASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 RBM17P3-201ENST00000417687 1192 ntBASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms