Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 BX276092.7-203ENST00000637198 1536 ntBASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 TREML5P-201ENST00000421694 576 ntBASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 AC140658.5-201ENST00000438532 169 ntBASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 SLC25A6P2-201ENST00000497974 877 ntBASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM43Q96BQ3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 ACTG1P4-201ENST00000425123 1122 ntBASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 AC125807.1-201ENST00000483097 614 ntBASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM43Q96BQ3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 AC009949.1-201ENST00000623048 1830 ntBASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 RBPMS2P1-201ENST00000437762 623 ntBASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 AL390754.1-201ENST00000619088 582 ntBASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM43Q96BQ3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms