Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN23Q96B33 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.46■□□□□ 0.39
CLDN23Q96B33 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN23Q96B33 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN23Q96B33 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN23Q96B33 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN23Q96B33 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN23Q96B33 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CLDN23Q96B33 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN23Q96B33 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN23Q96B33 TUBB3P1-201ENST00000405796 1332 ntBASIC17.46■□□□□ 0.38
CLDN23Q96B33 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN23Q96B33 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CLDN23Q96B33 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN23Q96B33 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CLDN23Q96B33 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN23Q96B33 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN23Q96B33 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN23Q96B33 RN7SL589P-201ENST00000481268 310 ntBASIC17.45■□□□□ 0.38
CLDN23Q96B33 AC079140.1-201ENST00000508039 487 ntBASIC17.45■□□□□ 0.38
CLDN23Q96B33 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN23Q96B33 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN23Q96B33 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 AL096828.2-201ENST00000567259 1965 ntBASIC17.45■□□□□ 0.38
CLDN23Q96B33 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CLDN23Q96B33 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN23Q96B33 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN23Q96B33 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.44■□□□□ 0.38
CLDN23Q96B33 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.44■□□□□ 0.38
CLDN23Q96B33 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 GK-202ENST00000378941 458 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 MIR661-201ENST00000384842 89 ntBASIC17.44■□□□□ 0.38
CLDN23Q96B33 MIR943-201ENST00000401286 94 ntBASIC17.44■□□□□ 0.38
CLDN23Q96B33 TFAMP1-201ENST00000412727 736 ntBASIC17.44■□□□□ 0.38
CLDN23Q96B33 FAM58DP-201ENST00000428076 619 ntBASIC17.44■□□□□ 0.38
CLDN23Q96B33 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 KLF2P3-201ENST00000451977 1087 ntBASIC17.44■□□□□ 0.38
CLDN23Q96B33 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.44■□□□□ 0.38
CLDN23Q96B33 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 AC243562.1-201ENST00000560672 389 ntBASIC17.44■□□□□ 0.38
CLDN23Q96B33 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 AL645728.2-201ENST00000641974 660 ntBASIC17.44■□□□□ 0.38
CLDN23Q96B33 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN23Q96B33 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN23Q96B33 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN23Q96B33 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN23Q96B33 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN23Q96B33 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CLDN23Q96B33 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN23Q96B33 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN23Q96B33 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN23Q96B33 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN23Q96B33 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN23Q96B33 KRT18P32-201ENST00000424695 1287 ntBASIC17.43■□□□□ 0.38
CLDN23Q96B33 GPS2P2-201ENST00000430745 888 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms