Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 RNA5SP421-201ENST00000516864 134 ntBASIC22.36■■□□□ 1.17
SMARCC1Q92922 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC22.36■■□□□ 1.17
SMARCC1Q92922 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC22.36■■□□□ 1.17
SMARCC1Q92922 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC22.36■■□□□ 1.17
SMARCC1Q92922 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC22.36■■□□□ 1.17
SMARCC1Q92922 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC22.36■■□□□ 1.17
SMARCC1Q92922 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC22.36■■□□□ 1.17
SMARCC1Q92922 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC1Q92922 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC1Q92922 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC1Q92922 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC22.36■■□□□ 1.17
SMARCC1Q92922 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC22.36■■□□□ 1.17
SMARCC1Q92922 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC1Q92922 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC22.36■■□□□ 1.17
SMARCC1Q92922 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC1Q92922 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC1Q92922 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC22.35■■□□□ 1.17
SMARCC1Q92922 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
SMARCC1Q92922 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC1Q92922 WBP2-203ENST00000433525 928 ntTSL 2 BASIC22.35■■□□□ 1.17
SMARCC1Q92922 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC22.35■■□□□ 1.17
SMARCC1Q92922 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC22.35■■□□□ 1.17
SMARCC1Q92922 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC22.35■■□□□ 1.17
SMARCC1Q92922 FAM86C2P-203ENST00000528684 1004 ntBASIC22.35■■□□□ 1.17
SMARCC1Q92922 AC093520.2-201ENST00000561830 333 ntBASIC22.35■■□□□ 1.17
SMARCC1Q92922 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC22.35■■□□□ 1.17
SMARCC1Q92922 AC026120.1-201ENST00000611536 926 ntBASIC22.35■■□□□ 1.17
SMARCC1Q92922 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
SMARCC1Q92922 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC1Q92922 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC1Q92922 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC22.35■■□□□ 1.17
SMARCC1Q92922 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMARCC1Q92922 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMARCC1Q92922 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMARCC1Q92922 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SMARCC1Q92922 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SMARCC1Q92922 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMARCC1Q92922 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
SMARCC1Q92922 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC22.34■■□□□ 1.17
SMARCC1Q92922 TIMM8BP1-201ENST00000452384 211 ntBASIC22.34■■□□□ 1.17
SMARCC1Q92922 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC22.34■■□□□ 1.17
SMARCC1Q92922 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC22.34■■□□□ 1.17
SMARCC1Q92922 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC22.34■■□□□ 1.17
SMARCC1Q92922 AJ011932.1-201ENST00000621707 465 ntBASIC22.34■■□□□ 1.17
SMARCC1Q92922 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SMARCC1Q92922 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC22.34■■□□□ 1.17
SMARCC1Q92922 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMARCC1Q92922 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMARCC1Q92922 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SMARCC1Q92922 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.34■■□□□ 1.17
SMARCC1Q92922 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMARCC1Q92922 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SMARCC1Q92922 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
SMARCC1Q92922 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMARCC1Q92922 AC093677.2-201ENST00000600169 1863 ntBASIC22.33■■□□□ 1.17
SMARCC1Q92922 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMARCC1Q92922 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMARCC1Q92922 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC22.33■■□□□ 1.17
SMARCC1Q92922 HNRNPFP1-201ENST00000391730 1133 ntBASIC22.33■■□□□ 1.17
SMARCC1Q92922 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC22.33■■□□□ 1.17
SMARCC1Q92922 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
SMARCC1Q92922 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC22.33■■□□□ 1.17
SMARCC1Q92922 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC22.33■■□□□ 1.17
SMARCC1Q92922 RPL28-209ENST00000560055 670 ntTSL 3 BASIC22.33■■□□□ 1.17
SMARCC1Q92922 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC22.33■■□□□ 1.17
SMARCC1Q92922 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMARCC1Q92922 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SMARCC1Q92922 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SMARCC1Q92922 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SMARCC1Q92922 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SMARCC1Q92922 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SMARCC1Q92922 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC22.33■■□□□ 1.16
SMARCC1Q92922 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
SMARCC1Q92922 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
SMARCC1Q92922 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
SMARCC1Q92922 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC1Q92922 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC1Q92922 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC1Q92922 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC1Q92922 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC1Q92922 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC22.32■■□□□ 1.16
SMARCC1Q92922 AL355306.1-201ENST00000415580 579 ntBASIC22.32■■□□□ 1.16
SMARCC1Q92922 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC22.32■■□□□ 1.16
SMARCC1Q92922 TAF8-206ENST00000472818 719 ntTSL 2 BASIC22.32■■□□□ 1.16
SMARCC1Q92922 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC22.32■■□□□ 1.16
SMARCC1Q92922 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC22.32■■□□□ 1.16
SMARCC1Q92922 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC22.32■■□□□ 1.16
SMARCC1Q92922 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC1Q92922 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC1Q92922 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC1Q92922 AQP6-203ENST00000551733 849 ntTSL 3 BASIC22.32■■□□□ 1.16
SMARCC1Q92922 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC1Q92922 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC22.32■■□□□ 1.16
SMARCC1Q92922 BSG-214ENST00000614867 960 ntTSL 3 BASIC22.32■■□□□ 1.16
SMARCC1Q92922 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC22.32■■□□□ 1.16
SMARCC1Q92922 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC1Q92922 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC22.32■■□□□ 1.16
SMARCC1Q92922 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
SMARCC1Q92922 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
SMARCC1Q92922 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms