Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 AC132872.4-202ENST00000622924 2756 ntBASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00308Q8TCZ7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 MIR638-201ENST00000385237 100 ntBASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 AC004911.1-201ENST00000416316 871 ntBASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 AC004951.3-201ENST00000418645 1148 ntBASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 AC004980.1-204ENST00000429707 299 ntBASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 AC097658.1-201ENST00000475555 843 ntBASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 AC132938.6-201ENST00000623828 1655 ntBASIC11.75□□□□□ -0.53
LINC00308Q8TCZ7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 AL024508.2-201ENST00000607749 1894 ntBASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00308Q8TCZ7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms