Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 AC097493.4-201ENST00000641197 219 ntBASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 AC073508.3-201ENST00000619697 1419 ntBASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 CROCCP1-201ENST00000426910 5675 ntBASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 LINC01451-201ENST00000623792 534 ntBASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLHC1Q8NHS4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 IGHGP-201ENST00000390555 1178 ntBASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 VENTXP5-201ENST00000523979 775 ntBASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.92■□□□□ 0.3
CLHC1Q8NHS4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 AL353692.3-201ENST00000407031 1396 ntBASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms