Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LINC01555Q8NAE3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
LINC01555Q8NAE3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01555Q8NAE3 AC009336.1-201ENST00000608941 1553 ntBASIC16.92■□□□□ 0.3
LINC01555Q8NAE3 AC005332.8-201ENST00000622750 2735 ntBASIC16.92■□□□□ 0.3
LINC01555Q8NAE3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01555Q8NAE3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01555Q8NAE3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01555Q8NAE3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LINC01555Q8NAE3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.92■□□□□ 0.3
LINC01555Q8NAE3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
LINC01555Q8NAE3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01555Q8NAE3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 BX005266.1-201ENST00000473402 457 ntBASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 AP002469.2-201ENST00000531724 424 ntBASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01555Q8NAE3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 AL020989.1-201ENST00000422979 469 ntBASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 STK19B-204ENST00000512515 211 ntBASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 AL160237.2-201ENST00000556165 472 ntBASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC01555Q8NAE3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LINC01555Q8NAE3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LINC01555Q8NAE3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 SCARNA2-201ENST00000458748 420 ntBASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 AC009078.2-202ENST00000463353 338 ntBASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 AC021087.4-201ENST00000563761 564 ntBASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01555Q8NAE3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms