Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.05■□□□□ 0.48
RTL3Q8N8U3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTL3Q8N8U3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTL3Q8N8U3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.05■□□□□ 0.48
RTL3Q8N8U3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTL3Q8N8U3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 PMPCAP1-201ENST00000508114 1576 ntBASIC18.04■□□□□ 0.48
RTL3Q8N8U3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.04■□□□□ 0.48
RTL3Q8N8U3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 HTR7P1-202ENST00000624664 4411 ntBASIC18.04■□□□□ 0.48
RTL3Q8N8U3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 STK25P1-201ENST00000585406 838 ntBASIC18.04■□□□□ 0.48
RTL3Q8N8U3 IFNL4P1-201ENST00000607083 540 ntBASIC18.04■□□□□ 0.48
RTL3Q8N8U3 AL139327.4-201ENST00000612362 153 ntBASIC18.04■□□□□ 0.48
RTL3Q8N8U3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RTL3Q8N8U3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 AC132938.5-201ENST00000624980 1813 ntBASIC18.03■□□□□ 0.48
RTL3Q8N8U3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 AC106795.1-205ENST00000512851 1056 ntBASIC18.03■□□□□ 0.48
RTL3Q8N8U3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 LINC01711-201ENST00000598340 967 ntBASIC18.03■□□□□ 0.48
RTL3Q8N8U3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 AP001269.4-201ENST00000609611 512 ntBASIC18.03■□□□□ 0.48
RTL3Q8N8U3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 AC073592.5-201ENST00000624854 528 ntBASIC18.03■□□□□ 0.48
RTL3Q8N8U3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL3Q8N8U3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTL3Q8N8U3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.02■□□□□ 0.48
RTL3Q8N8U3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.02■□□□□ 0.48
RTL3Q8N8U3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTL3Q8N8U3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTL3Q8N8U3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.02■□□□□ 0.48
RTL3Q8N8U3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.02■□□□□ 0.48
RTL3Q8N8U3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL3Q8N8U3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms