Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 GUSBP12-201ENST00000513727 720 ntBASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 AL136038.3-201ENST00000561909 1096 ntBASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 AL353801.3-201ENST00000609898 542 ntBASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 CROCCP2-202ENST00000412962 2773 ntBASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
LSMEM1Q8N8F7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.14■□□□□ 0.18
LSMEM1Q8N8F7 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.14■□□□□ 0.18
LSMEM1Q8N8F7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 RN7SL606P-201ENST00000472779 293 ntBASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
LSMEM1Q8N8F7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 COX5BP2-201ENST00000392354 334 ntBASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 HTR7P1-202ENST00000624664 4411 ntBASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSMEM1Q8N8F7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms