Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 CYMP-203ENST00000474680 1263 ntBASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 AC132938.5-201ENST00000624980 1813 ntBASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 AL645939.2-201ENST00000427340 991 ntBASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 ALG1L5P-201ENST00000482043 771 ntBASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 MIR3197-201ENST00000582241 73 ntBASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 AC010654.1-201ENST00000615722 808 ntBASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 ELL2P1-201ENST00000413990 1906 ntBASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SYNPOQ8N3V7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SYNPOQ8N3V7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SYNPOQ8N3V7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.83■□□□□ 0.45
SYNPOQ8N3V7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
SYNPOQ8N3V7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SYNPOQ8N3V7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.83■□□□□ 0.45
SYNPOQ8N3V7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.83■□□□□ 0.45
SYNPOQ8N3V7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SYNPOQ8N3V7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.83■□□□□ 0.45
SYNPOQ8N3V7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SYNPOQ8N3V7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 KLF4P1-201ENST00000412782 1185 ntBASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 AL805961.1-202ENST00000641562 540 ntBASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 AL354751.1-201ENST00000412768 1863 ntBASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPOQ8N3V7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms