Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 BCAR1-209ENST00000546196 1340 ntBASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 AC092364.2-202ENST00000597012 1073 ntBASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 AC010507.1-201ENST00000633895 436 ntBASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 AL138781.2-201ENST00000617896 1843 ntBASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEFF1Q8IYR6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 PTCHD3P3-201ENST00000403073 906 ntBASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 PDPK2P-202ENST00000562415 1191 ntBASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 AC019129.2-201ENST00000609837 1235 ntBASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 AL805961.1-202ENST00000641562 540 ntBASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEFF1Q8IYR6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 AC097637.2-201ENST00000624096 1997 ntBASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms