Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RP1L1Q8IWN7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RP1L1Q8IWN7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
RP1L1Q8IWN7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.93■□□□□ 0.14
RP1L1Q8IWN7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.93■□□□□ 0.14
RP1L1Q8IWN7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.93■□□□□ 0.14
RP1L1Q8IWN7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 AC244107.1-201ENST00000442033 332 ntBASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 NCF1C-201ENST00000438382 1427 ntBASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 AC073621.1-201ENST00000392730 636 ntBASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RP1L1Q8IWN7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 BX005266.1-201ENST00000473402 457 ntBASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 AC093214.1-201ENST00000511688 1107 ntBASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 AC009102.3-201ENST00000623118 1491 ntBASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
RP1L1Q8IWN7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 PDPK2P-202ENST00000562415 1191 ntBASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms