Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 FAM201B-201ENST00000458407 597 ntBASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 AP003071.4-201ENST00000562276 1284 ntBASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 AC142381.4-202ENST00000563973 229 ntBASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
NUDCD3Q8IVD9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NUDCD3Q8IVD9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NUDCD3Q8IVD9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NUDCD3Q8IVD9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.52■□□□□ 0.39
NUDCD3Q8IVD9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NUDCD3Q8IVD9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NUDCD3Q8IVD9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
NUDCD3Q8IVD9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NUDCD3Q8IVD9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 UBE2SP1-201ENST00000450587 669 ntBASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 RBM17P1-201ENST00000453646 1190 ntBASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 MIR3917-201ENST00000580971 93 ntBASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 ITM2C-210ENST00000620962 501 ntBASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NUDCD3Q8IVD9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 AC010653.2-201ENST00000623505 997 ntBASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 AC092865.7-201ENST00000641832 219 ntBASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 LYSMD4-203ENST00000378904 2122 ntBASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.5■□□□□ 0.39
NUDCD3Q8IVD9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms