Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 RN7SL589P-201ENST00000481268 310 ntBASIC14.7□□□□□ -0.06
CSMD2Q7Z408 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 AC112191.1-201ENST00000523689 701 ntBASIC14.69□□□□□ -0.06
CSMD2Q7Z408 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 AC140658.5-201ENST00000438532 169 ntBASIC14.69□□□□□ -0.06
CSMD2Q7Z408 AL592309.1-201ENST00000443127 649 ntBASIC14.69□□□□□ -0.06
CSMD2Q7Z408 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.69□□□□□ -0.06
CSMD2Q7Z408 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 SPCS2P4-201ENST00000436160 681 ntBASIC14.68□□□□□ -0.06
CSMD2Q7Z408 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 ACA64.2-201ENST00000459014 129 ntBASIC14.68□□□□□ -0.06
CSMD2Q7Z408 PARP8-206ENST00000503665 572 ntTSL 4 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 AC079140.1-201ENST00000508039 487 ntBASIC14.68□□□□□ -0.06
CSMD2Q7Z408 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 AC026120.1-201ENST00000611536 926 ntBASIC14.68□□□□□ -0.06
CSMD2Q7Z408 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD2Q7Z408 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD2Q7Z408 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD2Q7Z408 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD2Q7Z408 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD2Q7Z408 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD2Q7Z408 CXCL1P1-201ENST00000502804 216 ntBASIC14.67□□□□□ -0.06
CSMD2Q7Z408 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.67□□□□□ -0.06
CSMD2Q7Z408 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.67□□□□□ -0.06
CSMD2Q7Z408 AC017083.2-201ENST00000608069 979 ntBASIC14.67□□□□□ -0.06
CSMD2Q7Z408 AC019129.2-201ENST00000609837 1235 ntBASIC14.67□□□□□ -0.06
CSMD2Q7Z408 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CSMD2Q7Z408 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms