Protein–RNA interactions for Protein: Q7RTP0

NIPA1, Magnesium transporter NIPA1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA1Q7RTP0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 LYSMD4-203ENST00000378904 2122 ntBASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 LINC00982-205ENST00000420957 435 ntBASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 AC092910.1-201ENST00000482027 1129 ntBASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 MIR1199-201ENST00000621445 119 ntBASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPA1Q7RTP0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
NIPA1Q7RTP0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NIPA1Q7RTP0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 GPR89P-201ENST00000407924 1495 ntBASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 GNAS-203ENST00000306120 1878 ntBASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NIPA1Q7RTP0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 ELK2BP-201ENST00000415014 1224 ntBASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 RPL13AP23-201ENST00000480739 586 ntBASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 SLC25A1P1-201ENST00000528351 927 ntBASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 AC106730.1-201ENST00000566722 1090 ntBASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 AC117500.6-201ENST00000624871 588 ntBASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.63■□□□□ 0.73
NIPA1Q7RTP0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 AC006504.4-201ENST00000592118 1568 ntBASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NIPA1Q7RTP0 AF228730.7-201ENST00000641842 219 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms