Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 AC109322.1-201ENST00000524499 1264 ntBASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 AJ011932.1-201ENST00000621707 465 ntBASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 AC004461.1-201ENST00000412461 403 ntBASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 DUTP2-201ENST00000519164 463 ntBASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 AC012645.4-201ENST00000610691 1061 ntBASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
OTOP1Q7RTM1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 MRPL20P1-201ENST00000400819 433 ntBASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 RPS15P9-201ENST00000494093 319 ntBASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 KRT19P2-202ENST00000557173 1012 ntBASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 AC010507.1-201ENST00000633895 436 ntBASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 KRT8P47-201ENST00000604727 1398 ntBASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
OTOP1Q7RTM1 BCAR1-209ENST00000546196 1340 ntBASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms