Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 AC009102.3-201ENST00000623118 1491 ntBASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 AL590326.2-201ENST00000625139 305 ntBASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 AC133963.1-201ENST00000504166 1679 ntBASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF111Q6ZNA4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 AC093010.1-201ENST00000473625 1624 ntBASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF111Q6ZNA4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 LINC00554-201ENST00000564841 3011 ntBASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 MIR1224-201ENST00000408193 85 ntBASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 AC112907.2-201ENST00000448639 330 ntBASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 KRT18P38-201ENST00000449496 1282 ntBASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF111Q6ZNA4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms