Protein–RNA interactions for Protein: Q5VV17

OTUD1, OTU domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD1Q5VV17 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.17■□□□□ 0.5
OTUD1Q5VV17 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
OTUD1Q5VV17 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.17■□□□□ 0.5
OTUD1Q5VV17 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.17■□□□□ 0.5
OTUD1Q5VV17 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OTUD1Q5VV17 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
OTUD1Q5VV17 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OTUD1Q5VV17 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.17■□□□□ 0.5
OTUD1Q5VV17 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OTUD1Q5VV17 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.17■□□□□ 0.5
OTUD1Q5VV17 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.17■□□□□ 0.5
OTUD1Q5VV17 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OTUD1Q5VV17 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.17■□□□□ 0.5
OTUD1Q5VV17 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 BX005266.1-201ENST00000473402 457 ntBASIC18.16■□□□□ 0.5
OTUD1Q5VV17 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 NKAPP1-205ENST00000585790 367 ntBASIC18.16■□□□□ 0.5
OTUD1Q5VV17 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.16■□□□□ 0.5
OTUD1Q5VV17 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.16■□□□□ 0.5
OTUD1Q5VV17 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 AL020989.1-201ENST00000422979 469 ntBASIC18.15■□□□□ 0.5
OTUD1Q5VV17 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 AL031008.1-201ENST00000619963 541 ntBASIC18.15■□□□□ 0.5
OTUD1Q5VV17 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 AL135999.2-201ENST00000622438 1686 ntBASIC18.15■□□□□ 0.5
OTUD1Q5VV17 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OTUD1Q5VV17 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
OTUD1Q5VV17 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 AC104692.2-201ENST00000603054 253 ntBASIC18.14■□□□□ 0.49
OTUD1Q5VV17 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 AL139288.1-201ENST00000623748 933 ntBASIC18.14■□□□□ 0.49
OTUD1Q5VV17 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
OTUD1Q5VV17 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms