Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 SPDYE7P-202ENST00000420373 878 ntBASIC15.12■□□□□ 0.01
LRRK2Q5S007 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 RARRES2P8-201ENST00000566335 367 ntBASIC15.12■□□□□ 0.01
LRRK2Q5S007 STK25P1-201ENST00000585406 838 ntBASIC15.12■□□□□ 0.01
LRRK2Q5S007 WASH6P-202ENST00000359512 1437 ntBASIC15.12■□□□□ 0.01
LRRK2Q5S007 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRK2Q5S007 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRK2Q5S007 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRK2Q5S007 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 BCYRN1-201ENST00000418539 200 ntBASIC15.11■□□□□ 0.01
LRRK2Q5S007 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRK2Q5S007 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRK2Q5S007 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRK2Q5S007 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRK2Q5S007 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRK2Q5S007 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRK2Q5S007 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRK2Q5S007 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRK2Q5S007 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRK2Q5S007 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRK2Q5S007 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRK2Q5S007 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRK2Q5S007 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 COX5BP2-201ENST00000392354 334 ntBASIC15.1■□□□□ 0.01
LRRK2Q5S007 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRK2Q5S007 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRK2Q5S007 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRK2Q5S007 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRK2Q5S007 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 AP006294.1-201ENST00000415407 339 ntBASIC15.1■□□□□ 0.01
LRRK2Q5S007 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRK2Q5S007 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRK2Q5S007 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRK2Q5S007 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRK2Q5S007 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRK2Q5S007 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRK2Q5S007 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
LRRK2Q5S007 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRK2Q5S007 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRK2Q5S007 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRK2Q5S007 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRK2Q5S007 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 AC140912.1-201ENST00000577171 1054 ntBASIC15.09■□□□□ 0.01
LRRK2Q5S007 COX11-210ENST00000639671 696 ntBASIC15.09■□□□□ 0.01
LRRK2Q5S007 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRK2Q5S007 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRK2Q5S007 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRK2Q5S007 AC129492.6-201ENST00000611383 1305 ntBASIC15.09■□□□□ 0.01
LRRK2Q5S007 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRK2Q5S007 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRK2Q5S007 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms