Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SGO1Q5FBB7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SGO1Q5FBB7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SGO1Q5FBB7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.16■□□□□ 0.34
SGO1Q5FBB7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SGO1Q5FBB7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.16■□□□□ 0.34
SGO1Q5FBB7 CROCCP2-202ENST00000412962 2773 ntBASIC17.16■□□□□ 0.34
SGO1Q5FBB7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SGO1Q5FBB7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SGO1Q5FBB7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.16■□□□□ 0.34
SGO1Q5FBB7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 FER1L4-210ENST00000615531 5998 ntBASIC17.15■□□□□ 0.34
SGO1Q5FBB7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 MIR662-201ENST00000384847 95 ntBASIC17.15■□□□□ 0.34
SGO1Q5FBB7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 AC020916.1-201ENST00000587762 1774 ntBASIC17.15■□□□□ 0.34
SGO1Q5FBB7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SGO1Q5FBB7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
SGO1Q5FBB7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SGO1Q5FBB7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SGO1Q5FBB7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 AC005332.3-201ENST00000589904 676 ntBASIC17.14■□□□□ 0.33
SGO1Q5FBB7 GPR32P1-201ENST00000601788 811 ntBASIC17.14■□□□□ 0.33
SGO1Q5FBB7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SGO1Q5FBB7 HLA-J-201ENST00000462773 1622 ntBASIC17.14■□□□□ 0.33
SGO1Q5FBB7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms