Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 AL121894.2-201ENST00000602977 491 ntBASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 AC132938.5-201ENST00000624980 1813 ntBASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC178Q5BJE1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 LINC00304-203ENST00000565008 1864 ntBASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 AL662844.1-201ENST00000546340 181 ntBASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CCDC178Q5BJE1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC178Q5BJE1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC178Q5BJE1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC178Q5BJE1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC178Q5BJE1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC178Q5BJE1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CCDC178Q5BJE1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC178Q5BJE1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.58■□□□□ 0.88
CCDC178Q5BJE1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 FAM197Y8-203ENST00000450145 560 ntBASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 SIGLEC30P-201ENST00000455569 941 ntBASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 AP002469.2-201ENST00000531724 424 ntBASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 NKAPP1-205ENST00000585790 367 ntBASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 AC133963.1-201ENST00000504166 1679 ntBASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC178Q5BJE1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 AF186996.4-201ENST00000467186 377 ntBASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 AC073648.2-201ENST00000510116 352 ntBASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 AL022326.1-202ENST00000641533 845 ntBASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 GNAS-203ENST00000306120 1878 ntBASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC178Q5BJE1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms