Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
RHBDL3P58872 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.71■□□□□ 0.91
RHBDL3P58872 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.71■□□□□ 0.91
RHBDL3P58872 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.71■□□□□ 0.91
RHBDL3P58872 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.71■□□□□ 0.91
RHBDL3P58872 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.71■□□□□ 0.91
RHBDL3P58872 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
RHBDL3P58872 AP001160.2-201ENST00000596071 487 ntBASIC20.71■□□□□ 0.91
RHBDL3P58872 AL139327.4-201ENST00000612362 153 ntBASIC20.71■□□□□ 0.91
RHBDL3P58872 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.71■□□□□ 0.91
RHBDL3P58872 AC134684.3-201ENST00000641758 218 ntBASIC20.71■□□□□ 0.91
RHBDL3P58872 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.71■□□□□ 0.91
RHBDL3P58872 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
RHBDL3P58872 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.71■□□□□ 0.91
RHBDL3P58872 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.71■□□□□ 0.91
RHBDL3P58872 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RHBDL3P58872 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RHBDL3P58872 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.71■□□□□ 0.91
RHBDL3P58872 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.71■□□□□ 0.91
RHBDL3P58872 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDL3P58872 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.7■□□□□ 0.91
RHBDL3P58872 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
RHBDL3P58872 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHBDL3P58872 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHBDL3P58872 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.7■□□□□ 0.9
RHBDL3P58872 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHBDL3P58872 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
RHBDL3P58872 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.7■□□□□ 0.9
RHBDL3P58872 AC004967.1-201ENST00000453589 447 ntBASIC20.7■□□□□ 0.9
RHBDL3P58872 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.7■□□□□ 0.9
RHBDL3P58872 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.7■□□□□ 0.9
RHBDL3P58872 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.7■□□□□ 0.9
RHBDL3P58872 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
RHBDL3P58872 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.7■□□□□ 0.9
RHBDL3P58872 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RHBDL3P58872 AC010507.1-201ENST00000633895 436 ntBASIC20.7■□□□□ 0.9
RHBDL3P58872 LINC00304-203ENST00000565008 1864 ntBASIC20.7■□□□□ 0.9
RHBDL3P58872 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
RHBDL3P58872 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RHBDL3P58872 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
RHBDL3P58872 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHBDL3P58872 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RHBDL3P58872 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHBDL3P58872 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.7■□□□□ 0.9
RHBDL3P58872 RNF165-205ENST00000588679 2904 ntBASIC20.7■□□□□ 0.9
RHBDL3P58872 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RHBDL3P58872 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHBDL3P58872 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RHBDL3P58872 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.69■□□□□ 0.9
RHBDL3P58872 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RHBDL3P58872 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RHBDL3P58872 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.69■□□□□ 0.9
RHBDL3P58872 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.69■□□□□ 0.9
RHBDL3P58872 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RHBDL3P58872 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.69■□□□□ 0.9
RHBDL3P58872 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.69■□□□□ 0.9
RHBDL3P58872 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.69■□□□□ 0.9
RHBDL3P58872 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RHBDL3P58872 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RHBDL3P58872 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RHBDL3P58872 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RHBDL3P58872 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
RHBDL3P58872 ALG1L5P-201ENST00000482043 771 ntBASIC20.69■□□□□ 0.9
RHBDL3P58872 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.69■□□□□ 0.9
RHBDL3P58872 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.69■□□□□ 0.9
RHBDL3P58872 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RHBDL3P58872 GGTLC5P-201ENST00000617623 998 ntBASIC20.69■□□□□ 0.9
RHBDL3P58872 LINC01451-201ENST00000623792 534 ntBASIC20.69■□□□□ 0.9
RHBDL3P58872 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RHBDL3P58872 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.69■□□□□ 0.9
RHBDL3P58872 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RHBDL3P58872 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.69■□□□□ 0.9
RHBDL3P58872 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.69■□□□□ 0.9
RHBDL3P58872 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RHBDL3P58872 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
RHBDL3P58872 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.69■□□□□ 0.9
RHBDL3P58872 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RHBDL3P58872 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RHBDL3P58872 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RHBDL3P58872 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RHBDL3P58872 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.69■□□□□ 0.9
RHBDL3P58872 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RHBDL3P58872 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RHBDL3P58872 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms