Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.12□□□□□ -0.31
CMC4P56277 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.12□□□□□ -0.31
CMC4P56277 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 AC010460.3-201ENST00000511359 1579 ntBASIC13.12□□□□□ -0.31
CMC4P56277 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CMC4P56277 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.12□□□□□ -0.31
CMC4P56277 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 AC004870.1-201ENST00000315132 882 ntBASIC13.12□□□□□ -0.31
CMC4P56277 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 AL450487.1-201ENST00000426799 995 ntBASIC13.12□□□□□ -0.31
CMC4P56277 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.12□□□□□ -0.31
CMC4P56277 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.12□□□□□ -0.31
CMC4P56277 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.12□□□□□ -0.31
CMC4P56277 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.12□□□□□ -0.31
CMC4P56277 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.12□□□□□ -0.31
CMC4P56277 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.12□□□□□ -0.31
CMC4P56277 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.12□□□□□ -0.31
CMC4P56277 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.12□□□□□ -0.31
CMC4P56277 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.12□□□□□ -0.31
CMC4P56277 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CMC4P56277 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CMC4P56277 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.12□□□□□ -0.31
CMC4P56277 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 GNAS-203ENST00000306120 1878 ntBASIC13.12□□□□□ -0.31
CMC4P56277 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.12□□□□□ -0.31
CMC4P56277 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
CMC4P56277 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CMC4P56277 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.11□□□□□ -0.31
CMC4P56277 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.11□□□□□ -0.31
CMC4P56277 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CMC4P56277 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.11□□□□□ -0.31
CMC4P56277 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.11□□□□□ -0.31
CMC4P56277 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.11□□□□□ -0.31
CMC4P56277 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.11□□□□□ -0.31
CMC4P56277 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 AC132008.2-207ENST00000454517 770 ntBASIC13.11□□□□□ -0.31
CMC4P56277 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CMC4P56277 KRT126P-201ENST00000549467 1181 ntBASIC13.11□□□□□ -0.31
CMC4P56277 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.11□□□□□ -0.31
CMC4P56277 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.11□□□□□ -0.31
CMC4P56277 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.11□□□□□ -0.31
CMC4P56277 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.11□□□□□ -0.31
CMC4P56277 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.11□□□□□ -0.31
CMC4P56277 AC064862.7-201ENST00000604520 867 ntBASIC13.11□□□□□ -0.31
CMC4P56277 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CMC4P56277 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CMC4P56277 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.11□□□□□ -0.31
CMC4P56277 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CMC4P56277 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.11□□□□□ -0.31
CMC4P56277 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CMC4P56277 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CMC4P56277 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms