Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.32■□□□□ 0.68
ATN1P54259 AL627223.1-201ENST00000416693 442 ntBASIC19.32■□□□□ 0.68
ATN1P54259 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.32■□□□□ 0.68
ATN1P54259 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.32■□□□□ 0.68
ATN1P54259 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.32■□□□□ 0.68
ATN1P54259 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.32■□□□□ 0.68
ATN1P54259 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.32■□□□□ 0.68
ATN1P54259 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.32■□□□□ 0.68
ATN1P54259 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
ATN1P54259 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.32■□□□□ 0.68
ATN1P54259 AC012645.4-201ENST00000610691 1061 ntBASIC19.32■□□□□ 0.68
ATN1P54259 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.32■□□□□ 0.68
ATN1P54259 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC19.32■□□□□ 0.68
ATN1P54259 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.32■□□□□ 0.68
ATN1P54259 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.32■□□□□ 0.68
ATN1P54259 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.32■□□□□ 0.68
ATN1P54259 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ATN1P54259 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATN1P54259 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.32■□□□□ 0.68
ATN1P54259 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATN1P54259 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.32■□□□□ 0.68
ATN1P54259 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.32■□□□□ 0.68
ATN1P54259 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
ATN1P54259 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATN1P54259 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
ATN1P54259 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATN1P54259 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.31■□□□□ 0.68
ATN1P54259 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATN1P54259 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATN1P54259 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATN1P54259 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.31■□□□□ 0.68
ATN1P54259 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ATN1P54259 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATN1P54259 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATN1P54259 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATN1P54259 AC067863.1-201ENST00000494933 530 ntBASIC19.31■□□□□ 0.68
ATN1P54259 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.31■□□□□ 0.68
ATN1P54259 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.31■□□□□ 0.68
ATN1P54259 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.31■□□□□ 0.68
ATN1P54259 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.31■□□□□ 0.68
ATN1P54259 STK25P1-201ENST00000585406 838 ntBASIC19.31■□□□□ 0.68
ATN1P54259 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
ATN1P54259 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATN1P54259 OR13I1P-201ENST00000609811 1264 ntBASIC19.31■□□□□ 0.68
ATN1P54259 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATN1P54259 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATN1P54259 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.31■□□□□ 0.68
ATN1P54259 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.31■□□□□ 0.68
ATN1P54259 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.31■□□□□ 0.68
ATN1P54259 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATN1P54259 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATN1P54259 AC126763.1-201ENST00000552015 2118 ntBASIC19.31■□□□□ 0.68
ATN1P54259 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATN1P54259 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.31■□□□□ 0.68
ATN1P54259 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ATN1P54259 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ATN1P54259 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATN1P54259 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATN1P54259 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.3■□□□□ 0.68
ATN1P54259 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
ATN1P54259 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATN1P54259 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATN1P54259 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATN1P54259 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.3■□□□□ 0.68
ATN1P54259 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATN1P54259 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATN1P54259 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.3■□□□□ 0.68
ATN1P54259 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.3■□□□□ 0.68
ATN1P54259 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATN1P54259 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ATN1P54259 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATN1P54259 AC005237.2-201ENST00000434368 219 ntBASIC19.3■□□□□ 0.68
ATN1P54259 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.3■□□□□ 0.68
ATN1P54259 AC112191.1-201ENST00000523689 701 ntBASIC19.3■□□□□ 0.68
ATN1P54259 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATN1P54259 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.3■□□□□ 0.68
ATN1P54259 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.3■□□□□ 0.68
ATN1P54259 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.3■□□□□ 0.68
ATN1P54259 AC009093.7-201ENST00000623853 1223 ntBASIC19.3■□□□□ 0.68
ATN1P54259 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.3■□□□□ 0.68
ATN1P54259 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATN1P54259 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATN1P54259 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATN1P54259 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms