Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDR1P51861 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.3■□□□□ 0.68
CDR1P51861 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.3■□□□□ 0.68
CDR1P51861 AC009065.1-201ENST00000564055 1225 ntBASIC19.3■□□□□ 0.68
CDR1P51861 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.3■□□□□ 0.68
CDR1P51861 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.3■□□□□ 0.68
CDR1P51861 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.3■□□□□ 0.68
CDR1P51861 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 AC233702.3-201ENST00000578656 1387 ntBASIC19.3■□□□□ 0.68
CDR1P51861 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.3■□□□□ 0.68
CDR1P51861 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDR1P51861 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
CDR1P51861 SIRPAP1-201ENST00000448467 1770 ntBASIC19.29■□□□□ 0.68
CDR1P51861 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDR1P51861 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDR1P51861 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDR1P51861 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDR1P51861 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.29■□□□□ 0.68
CDR1P51861 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDR1P51861 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDR1P51861 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDR1P51861 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.29■□□□□ 0.68
CDR1P51861 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.29■□□□□ 0.68
CDR1P51861 DRAXINP1-201ENST00000437611 948 ntBASIC19.29■□□□□ 0.68
CDR1P51861 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.29■□□□□ 0.68
CDR1P51861 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
CDR1P51861 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDR1P51861 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.29■□□□□ 0.68
CDR1P51861 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CDR1P51861 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.29■□□□□ 0.68
CDR1P51861 AC009053.2-201ENST00000563701 2365 ntBASIC19.29■□□□□ 0.68
CDR1P51861 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDR1P51861 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDR1P51861 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDR1P51861 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.29■□□□□ 0.68
CDR1P51861 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDR1P51861 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDR1P51861 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.29■□□□□ 0.68
CDR1P51861 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDR1P51861 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CDR1P51861 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDR1P51861 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDR1P51861 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.28■□□□□ 0.68
CDR1P51861 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDR1P51861 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CDR1P51861 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDR1P51861 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDR1P51861 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDR1P51861 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDR1P51861 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.28■□□□□ 0.68
CDR1P51861 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.28■□□□□ 0.68
CDR1P51861 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDR1P51861 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDR1P51861 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.28■□□□□ 0.68
CDR1P51861 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDR1P51861 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.28■□□□□ 0.68
CDR1P51861 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.28■□□□□ 0.68
CDR1P51861 AC099336.1-202ENST00000602961 463 ntBASIC19.28■□□□□ 0.68
CDR1P51861 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.28■□□□□ 0.68
CDR1P51861 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.28■□□□□ 0.68
CDR1P51861 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDR1P51861 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDR1P51861 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDR1P51861 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDR1P51861 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDR1P51861 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDR1P51861 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDR1P51861 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.28■□□□□ 0.68
CDR1P51861 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDR1P51861 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDR1P51861 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDR1P51861 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDR1P51861 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.27■□□□□ 0.68
CDR1P51861 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDR1P51861 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDR1P51861 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CDR1P51861 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDR1P51861 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDR1P51861 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDR1P51861 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDR1P51861 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.27■□□□□ 0.68
CDR1P51861 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
CDR1P51861 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDR1P51861 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDR1P51861 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDR1P51861 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDR1P51861 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.27■□□□□ 0.68
CDR1P51861 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.27■□□□□ 0.68
CDR1P51861 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDR1P51861 RN7SL606P-201ENST00000472779 293 ntBASIC19.27■□□□□ 0.68
CDR1P51861 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms