Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
SMARCA4P51532 AC046185.3-201ENST00000623228 1824 ntBASIC31.17■■■□□ 2.58
SMARCA4P51532 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCA4P51532 RAC2-204ENST00000406508 893 ntTSL 5 BASIC31.17■■■□□ 2.58
SMARCA4P51532 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
SMARCA4P51532 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
SMARCA4P51532 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC31.17■■■□□ 2.58
SMARCA4P51532 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
SMARCA4P51532 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC31.17■■■□□ 2.58
SMARCA4P51532 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCA4P51532 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCA4P51532 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SMARCA4P51532 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SMARCA4P51532 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
SMARCA4P51532 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
SMARCA4P51532 AL671277.1-201ENST00000429656 993 ntBASIC31.16■■■□□ 2.58
SMARCA4P51532 INGX-202ENST00000489074 768 ntBASIC31.16■■■□□ 2.58
SMARCA4P51532 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SMARCA4P51532 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC31.16■■■□□ 2.58
SMARCA4P51532 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC31.16■■■□□ 2.58
SMARCA4P51532 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC31.16■■■□□ 2.58
SMARCA4P51532 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SMARCA4P51532 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SMARCA4P51532 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC31.16■■■□□ 2.58
SMARCA4P51532 AC063926.2-201ENST00000623766 1308 ntBASIC31.16■■■□□ 2.58
SMARCA4P51532 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC31.16■■■□□ 2.58
SMARCA4P51532 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC31.16■■■□□ 2.58
SMARCA4P51532 AP005018.1-201ENST00000525475 301 ntBASIC31.16■■■□□ 2.58
SMARCA4P51532 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC31.16■■■□□ 2.58
SMARCA4P51532 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
SMARCA4P51532 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC31.15■■■□□ 2.58
SMARCA4P51532 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC31.15■■■□□ 2.58
SMARCA4P51532 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SMARCA4P51532 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC31.15■■■□□ 2.58
SMARCA4P51532 MRPS18AP1-201ENST00000414458 589 ntBASIC31.15■■■□□ 2.58
SMARCA4P51532 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC31.15■■■□□ 2.58
SMARCA4P51532 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC31.15■■■□□ 2.58
SMARCA4P51532 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SMARCA4P51532 LINC02560-201ENST00000596379 459 ntBASIC31.15■■■□□ 2.58
SMARCA4P51532 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
SMARCA4P51532 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC31.15■■■□□ 2.58
SMARCA4P51532 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC31.14■■■□□ 2.58
SMARCA4P51532 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SMARCA4P51532 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC31.14■■■□□ 2.58
SMARCA4P51532 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
SMARCA4P51532 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
SMARCA4P51532 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SMARCA4P51532 GRAP-202ENST00000395635 834 ntTSL 2 BASIC31.14■■■□□ 2.58
SMARCA4P51532 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
SMARCA4P51532 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC31.14■■■□□ 2.58
SMARCA4P51532 CECR7-204ENST00000609932 568 ntTSL 2 BASIC31.14■■■□□ 2.58
SMARCA4P51532 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SMARCA4P51532 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SMARCA4P51532 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
SMARCA4P51532 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC31.14■■■□□ 2.58
SMARCA4P51532 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCA4P51532 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC31.13■■■□□ 2.57
SMARCA4P51532 PPP6R2P1-201ENST00000450880 1275 ntBASIC31.13■■■□□ 2.57
SMARCA4P51532 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC31.13■■■□□ 2.57
SMARCA4P51532 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCA4P51532 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC31.13■■■□□ 2.57
SMARCA4P51532 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCA4P51532 AC026150.2-201ENST00000564693 1156 ntBASIC31.13■■■□□ 2.57
SMARCA4P51532 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCA4P51532 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC31.13■■■□□ 2.57
SMARCA4P51532 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
SMARCA4P51532 AC008677.1-201ENST00000519230 1561 ntBASIC31.13■■■□□ 2.57
SMARCA4P51532 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCA4P51532 AC073130.3-201ENST00000624389 2278 ntBASIC31.13■■■□□ 2.57
SMARCA4P51532 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
SMARCA4P51532 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCA4P51532 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
SMARCA4P51532 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCA4P51532 RBPMS2P1-201ENST00000437762 623 ntBASIC31.13■■■□□ 2.57
SMARCA4P51532 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC31.13■■■□□ 2.57
SMARCA4P51532 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCA4P51532 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC31.13■■■□□ 2.57
SMARCA4P51532 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCA4P51532 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
SMARCA4P51532 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SMARCA4P51532 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC31.12■■■□□ 2.57
SMARCA4P51532 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC31.12■■■□□ 2.57
SMARCA4P51532 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
SMARCA4P51532 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SMARCA4P51532 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC31.12■■■□□ 2.57
SMARCA4P51532 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SMARCA4P51532 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC31.12■■■□□ 2.57
SMARCA4P51532 GATD1-206ENST00000526325 756 ntTSL 5 BASIC31.12■■■□□ 2.57
SMARCA4P51532 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC31.12■■■□□ 2.57
SMARCA4P51532 CD7-202ENST00000578509 925 ntTSL 3 BASIC31.12■■■□□ 2.57
SMARCA4P51532 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SMARCA4P51532 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SMARCA4P51532 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SMARCA4P51532 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
SMARCA4P51532 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SMARCA4P51532 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
SMARCA4P51532 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC31.11■■■□□ 2.57
SMARCA4P51532 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC31.11■■■□□ 2.57
SMARCA4P51532 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SMARCA4P51532 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms