Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 PVRIG2P-201ENST00000435460 978 ntBASIC20.56■□□□□ 0.88
MRE11P49959 ATP5G1P1-201ENST00000448724 379 ntBASIC20.56■□□□□ 0.88
MRE11P49959 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.56■□□□□ 0.88
MRE11P49959 AC022616.7-201ENST00000525383 220 ntBASIC20.56■□□□□ 0.88
MRE11P49959 AC010203.1-204ENST00000548782 407 ntBASIC20.56■□□□□ 0.88
MRE11P49959 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MRE11P49959 KRT8P41-201ENST00000533985 1514 ntBASIC20.56■□□□□ 0.88
MRE11P49959 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MRE11P49959 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
MRE11P49959 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
MRE11P49959 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MRE11P49959 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
MRE11P49959 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRE11P49959 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRE11P49959 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRE11P49959 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.55■□□□□ 0.88
MRE11P49959 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MRE11P49959 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.55■□□□□ 0.88
MRE11P49959 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRE11P49959 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRE11P49959 FAM197Y1-201ENST00000421178 764 ntBASIC20.55■□□□□ 0.88
MRE11P49959 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.55■□□□□ 0.88
MRE11P49959 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.55■□□□□ 0.88
MRE11P49959 AC004263.2-201ENST00000617183 678 ntBASIC20.55■□□□□ 0.88
MRE11P49959 AC010947.1-201ENST00000623454 693 ntBASIC20.55■□□□□ 0.88
MRE11P49959 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRE11P49959 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.55■□□□□ 0.88
MRE11P49959 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRE11P49959 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
MRE11P49959 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRE11P49959 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.55■□□□□ 0.88
MRE11P49959 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRE11P49959 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
MRE11P49959 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MRE11P49959 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.54■□□□□ 0.88
MRE11P49959 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
MRE11P49959 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.54■□□□□ 0.88
MRE11P49959 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.54■□□□□ 0.88
MRE11P49959 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.54■□□□□ 0.88
MRE11P49959 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.54■□□□□ 0.88
MRE11P49959 AC120498.8-201ENST00000614275 531 ntBASIC20.54■□□□□ 0.88
MRE11P49959 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.54■□□□□ 0.88
MRE11P49959 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.54■□□□□ 0.88
MRE11P49959 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
MRE11P49959 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
MRE11P49959 CROCCP1-201ENST00000426910 5675 ntBASIC20.54■□□□□ 0.88
MRE11P49959 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
MRE11P49959 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
MRE11P49959 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRE11P49959 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.54■□□□□ 0.88
MRE11P49959 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC20.54■□□□□ 0.88
MRE11P49959 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.53■□□□□ 0.88
MRE11P49959 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.53■□□□□ 0.88
MRE11P49959 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
MRE11P49959 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
MRE11P49959 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.53■□□□□ 0.88
MRE11P49959 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.53■□□□□ 0.88
MRE11P49959 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.53■□□□□ 0.88
MRE11P49959 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 CLEC4GP1-201ENST00000596555 870 ntBASIC20.53■□□□□ 0.88
MRE11P49959 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.53■□□□□ 0.88
MRE11P49959 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
MRE11P49959 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms