Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SLC6A12P48065 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A12P48065 AC116353.5-201ENST00000638148 1699 ntBASIC16.98■□□□□ 0.31
SLC6A12P48065 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC6A12P48065 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A12P48065 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC6A12P48065 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A12P48065 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A12P48065 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
SLC6A12P48065 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A12P48065 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A12P48065 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A12P48065 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
SLC6A12P48065 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A12P48065 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC6A12P48065 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC6A12P48065 AC111152.3-201ENST00000569699 673 ntBASIC16.98■□□□□ 0.31
SLC6A12P48065 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A12P48065 AD001527.2-201ENST00000622994 785 ntBASIC16.98■□□□□ 0.31
SLC6A12P48065 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SLC6A12P48065 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SLC6A12P48065 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC6A12P48065 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC6A12P48065 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A12P48065 INTS4P1-201ENST00000438455 1935 ntBASIC16.98■□□□□ 0.31
SLC6A12P48065 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A12P48065 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SLC6A12P48065 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC6A12P48065 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC6A12P48065 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC6A12P48065 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC6A12P48065 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC6A12P48065 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
SLC6A12P48065 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 MINOS1P3-201ENST00000457048 203 ntBASIC16.97■□□□□ 0.31
SLC6A12P48065 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SLC6A12P48065 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC6A12P48065 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC6A12P48065 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC6A12P48065 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC6A12P48065 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.97■□□□□ 0.31
SLC6A12P48065 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC6A12P48065 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC6A12P48065 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC6A12P48065 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SLC6A12P48065 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SLC6A12P48065 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC6A12P48065 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A12P48065 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A12P48065 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLC6A12P48065 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A12P48065 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A12P48065 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A12P48065 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC6A12P48065 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLC6A12P48065 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A12P48065 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A12P48065 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A12P48065 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A12P48065 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SLC6A12P48065 SLC25A1P3-201ENST00000395415 828 ntBASIC16.96■□□□□ 0.31
SLC6A12P48065 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SLC6A12P48065 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC6A12P48065 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC6A12P48065 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A12P48065 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC6A12P48065 AC074051.2-201ENST00000565115 352 ntBASIC16.96■□□□□ 0.31
SLC6A12P48065 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
SLC6A12P48065 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.96■□□□□ 0.31
SLC6A12P48065 AC092119.3-201ENST00000612618 583 ntBASIC16.96■□□□□ 0.31
SLC6A12P48065 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A12P48065 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A12P48065 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A12P48065 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC6A12P48065 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SLC6A12P48065 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC6A12P48065 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLC6A12P48065 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A12P48065 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms