Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LINC01023-201ENST00000606054 436 ntBASIC18.77■□□□□ 0.6
SSR1P43307 AC004263.2-201ENST00000617183 678 ntBASIC18.77■□□□□ 0.6
SSR1P43307 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SSR1P43307 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SSR1P43307 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SSR1P43307 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSR1P43307 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SSR1P43307 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SSR1P43307 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SSR1P43307 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
SSR1P43307 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.77■□□□□ 0.59
SSR1P43307 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.59
SSR1P43307 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SSR1P43307 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SSR1P43307 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SSR1P43307 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.76■□□□□ 0.59
SSR1P43307 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.76■□□□□ 0.59
SSR1P43307 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SSR1P43307 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 AK4P3-201ENST00000418260 669 ntBASIC18.76■□□□□ 0.59
SSR1P43307 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.76■□□□□ 0.59
SSR1P43307 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SSR1P43307 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.76■□□□□ 0.59
SSR1P43307 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.76■□□□□ 0.59
SSR1P43307 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.76■□□□□ 0.59
SSR1P43307 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.76■□□□□ 0.59
SSR1P43307 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SSR1P43307 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.76■□□□□ 0.59
SSR1P43307 AC099398.1-201ENST00000567919 2776 ntBASIC18.76■□□□□ 0.59
SSR1P43307 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SSR1P43307 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 PRORSD1P-202ENST00000563365 2154 ntBASIC18.76■□□□□ 0.59
SSR1P43307 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SSR1P43307 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSR1P43307 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SSR1P43307 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SSR1P43307 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.75■□□□□ 0.59
SSR1P43307 AC073508.3-201ENST00000619697 1419 ntBASIC18.75■□□□□ 0.59
SSR1P43307 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.75■□□□□ 0.59
SSR1P43307 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 AC009949.1-201ENST00000623048 1830 ntBASIC18.75■□□□□ 0.59
SSR1P43307 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SSR1P43307 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.75■□□□□ 0.59
SSR1P43307 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.75■□□□□ 0.59
SSR1P43307 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.75■□□□□ 0.59
SSR1P43307 RNF152P1-201ENST00000397754 604 ntBASIC18.75■□□□□ 0.59
SSR1P43307 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.75■□□□□ 0.59
SSR1P43307 TSPY12P-201ENST00000421279 868 ntBASIC18.75■□□□□ 0.59
SSR1P43307 TSPY5P-201ENST00000426936 936 ntBASIC18.75■□□□□ 0.59
SSR1P43307 KRT18P65-201ENST00000439811 1286 ntBASIC18.75■□□□□ 0.59
SSR1P43307 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.75■□□□□ 0.59
SSR1P43307 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.75■□□□□ 0.59
SSR1P43307 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.75■□□□□ 0.59
SSR1P43307 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.75■□□□□ 0.59
SSR1P43307 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
SSR1P43307 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SSR1P43307 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.75■□□□□ 0.59
SSR1P43307 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SSR1P43307 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSR1P43307 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.74■□□□□ 0.59
SSR1P43307 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.74■□□□□ 0.59
SSR1P43307 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.74■□□□□ 0.59
SSR1P43307 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 AC139713.2-201ENST00000641328 2723 ntBASIC18.74■□□□□ 0.59
SSR1P43307 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SSR1P43307 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SSR1P43307 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 KRT89P-201ENST00000620027 1478 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms