Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CXCL5P42830 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC11.92□□□□□ -0.5
CXCL5P42830 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC11.92□□□□□ -0.5
CXCL5P42830 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CXCL5P42830 CR769767.2-201ENST00000622735 460 ntBASIC11.92□□□□□ -0.5
CXCL5P42830 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CXCL5P42830 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CXCL5P42830 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC11.92□□□□□ -0.5
CXCL5P42830 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CXCL5P42830 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CXCL5P42830 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CXCL5P42830 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC11.92□□□□□ -0.5
CXCL5P42830 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC11.92□□□□□ -0.5
CXCL5P42830 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC11.91□□□□□ -0.5
CXCL5P42830 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC11.91□□□□□ -0.5
CXCL5P42830 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC11.91□□□□□ -0.5
CXCL5P42830 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC11.91□□□□□ -0.5
CXCL5P42830 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC11.91□□□□□ -0.5
CXCL5P42830 LINC00304-203ENST00000565008 1864 ntBASIC11.91□□□□□ -0.5
CXCL5P42830 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC11.91□□□□□ -0.5
CXCL5P42830 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.91□□□□□ -0.5
CXCL5P42830 AP001094.4-201ENST00000579008 2176 ntBASIC11.91□□□□□ -0.5
CXCL5P42830 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.91□□□□□ -0.5
CXCL5P42830 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CXCL5P42830 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC11.91□□□□□ -0.5
CXCL5P42830 ID1-201ENST00000376105 1233 ntBASIC11.91□□□□□ -0.5
CXCL5P42830 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC11.91□□□□□ -0.5
CXCL5P42830 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC11.91□□□□□ -0.5
CXCL5P42830 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC11.91□□□□□ -0.5
CXCL5P42830 DDX43P3-201ENST00000441064 443 ntBASIC11.91□□□□□ -0.5
CXCL5P42830 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC11.91□□□□□ -0.5
CXCL5P42830 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC11.91□□□□□ -0.5
CXCL5P42830 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC11.91□□□□□ -0.5
CXCL5P42830 AL353719.1-201ENST00000566847 864 ntBASIC11.91□□□□□ -0.5
CXCL5P42830 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC11.91□□□□□ -0.5
CXCL5P42830 AC010240.3-201ENST00000607688 395 ntBASIC11.91□□□□□ -0.5
CXCL5P42830 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 BANP-227ENST00000626016 2144 ntTSL 2 BASIC11.91□□□□□ -0.5
CXCL5P42830 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC11.91□□□□□ -0.5
CXCL5P42830 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CXCL5P42830 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CXCL5P42830 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC11.91□□□□□ -0.5
CXCL5P42830 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC11.91□□□□□ -0.5
CXCL5P42830 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CXCL5P42830 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC11.91□□□□□ -0.5
CXCL5P42830 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC11.91□□□□□ -0.5
CXCL5P42830 PP12613-201ENST00000424958 2230 ntBASIC11.91□□□□□ -0.5
CXCL5P42830 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC11.91□□□□□ -0.5
CXCL5P42830 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CXCL5P42830 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CXCL5P42830 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC11.91□□□□□ -0.5
CXCL5P42830 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC11.91□□□□□ -0.5
CXCL5P42830 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC11.9□□□□□ -0.5
CXCL5P42830 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC11.9□□□□□ -0.5
CXCL5P42830 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC11.9□□□□□ -0.5
CXCL5P42830 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CXCL5P42830 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC11.9□□□□□ -0.5
CXCL5P42830 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC11.9□□□□□ -0.5
CXCL5P42830 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CXCL5P42830 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC11.9□□□□□ -0.5
CXCL5P42830 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms