Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2CP42773 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2CP42773 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.66■□□□□ 0.26
CDKN2CP42773 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2CP42773 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2CP42773 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2CP42773 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2CP42773 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2CP42773 AC113347.1-201ENST00000413321 391 ntBASIC16.66■□□□□ 0.26
CDKN2CP42773 AC117947.1-201ENST00000427448 529 ntBASIC16.66■□□□□ 0.26
CDKN2CP42773 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2CP42773 MTCL1P1-201ENST00000446207 792 ntBASIC16.66■□□□□ 0.26
CDKN2CP42773 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.66■□□□□ 0.26
CDKN2CP42773 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.66■□□□□ 0.26
CDKN2CP42773 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.66■□□□□ 0.26
CDKN2CP42773 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDKN2CP42773 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.66■□□□□ 0.26
CDKN2CP42773 AC133561.5-201ENST00000635547 218 ntBASIC16.66■□□□□ 0.26
CDKN2CP42773 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CDKN2CP42773 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2CP42773 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2CP42773 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2CP42773 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2CP42773 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2CP42773 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2CP42773 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2CP42773 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.66■□□□□ 0.26
CDKN2CP42773 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
CDKN2CP42773 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.65■□□□□ 0.26
CDKN2CP42773 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDKN2CP42773 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2CP42773 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2CP42773 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2CP42773 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.65■□□□□ 0.26
CDKN2CP42773 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2CP42773 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.65■□□□□ 0.26
CDKN2CP42773 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2CP42773 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2CP42773 MIR662-201ENST00000384847 95 ntBASIC16.65■□□□□ 0.26
CDKN2CP42773 FAM8A6P-201ENST00000407496 1135 ntBASIC16.65■□□□□ 0.26
CDKN2CP42773 AC068472.1-201ENST00000474589 881 ntBASIC16.65■□□□□ 0.26
CDKN2CP42773 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2CP42773 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.65■□□□□ 0.26
CDKN2CP42773 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.65■□□□□ 0.26
CDKN2CP42773 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.65■□□□□ 0.26
CDKN2CP42773 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.65■□□□□ 0.26
CDKN2CP42773 AC012306.2-201ENST00000609350 630 ntBASIC16.65■□□□□ 0.26
CDKN2CP42773 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2CP42773 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.65■□□□□ 0.26
CDKN2CP42773 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDKN2CP42773 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CDKN2CP42773 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2CP42773 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2CP42773 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2CP42773 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2CP42773 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKN2CP42773 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.65■□□□□ 0.26
CDKN2CP42773 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CDKN2CP42773 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDKN2CP42773 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CDKN2CP42773 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDKN2CP42773 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDKN2CP42773 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 LINC01311-201ENST00000565162 1445 ntBASIC16.64■□□□□ 0.25
CDKN2CP42773 AC073508.3-201ENST00000619697 1419 ntBASIC16.64■□□□□ 0.25
CDKN2CP42773 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDKN2CP42773 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.64■□□□□ 0.25
CDKN2CP42773 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.64■□□□□ 0.25
CDKN2CP42773 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.64■□□□□ 0.25
CDKN2CP42773 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.64■□□□□ 0.25
CDKN2CP42773 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.64■□□□□ 0.25
CDKN2CP42773 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.64■□□□□ 0.25
CDKN2CP42773 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.64■□□□□ 0.25
CDKN2CP42773 AL137013.1-201ENST00000432946 1228 ntBASIC16.64■□□□□ 0.25
CDKN2CP42773 BX664615.1-201ENST00000443558 458 ntBASIC16.64■□□□□ 0.25
CDKN2CP42773 VENTXP5-201ENST00000523979 775 ntBASIC16.64■□□□□ 0.25
CDKN2CP42773 ZNF444P1-201ENST00000559497 298 ntBASIC16.64■□□□□ 0.25
CDKN2CP42773 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.64■□□□□ 0.25
CDKN2CP42773 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.64■□□□□ 0.25
CDKN2CP42773 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDKN2CP42773 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.64■□□□□ 0.25
CDKN2CP42773 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDKN2CP42773 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CDKN2CP42773 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms