Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SOX11P35716 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
SOX11P35716 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SOX11P35716 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SOX11P35716 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SOX11P35716 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.27■□□□□ 0.35
SOX11P35716 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SOX11P35716 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX11P35716 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SOX11P35716 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
SOX11P35716 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX11P35716 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SOX11P35716 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX11P35716 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SOX11P35716 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX11P35716 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX11P35716 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX11P35716 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.26■□□□□ 0.35
SOX11P35716 MIR564-202ENST00000385049 94 ntBASIC17.26■□□□□ 0.35
SOX11P35716 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX11P35716 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.26■□□□□ 0.35
SOX11P35716 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.26■□□□□ 0.35
SOX11P35716 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.26■□□□□ 0.35
SOX11P35716 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.26■□□□□ 0.35
SOX11P35716 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.26■□□□□ 0.35
SOX11P35716 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.26■□□□□ 0.35
SOX11P35716 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.26■□□□□ 0.35
SOX11P35716 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.26■□□□□ 0.35
SOX11P35716 KRT8P50-201ENST00000562022 1438 ntBASIC17.26■□□□□ 0.35
SOX11P35716 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX11P35716 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SOX11P35716 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.26■□□□□ 0.35
SOX11P35716 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX11P35716 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SOX11P35716 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SOX11P35716 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.26■□□□□ 0.35
SOX11P35716 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SOX11P35716 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX11P35716 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SOX11P35716 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX11P35716 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX11P35716 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX11P35716 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX11P35716 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX11P35716 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SOX11P35716 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX11P35716 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX11P35716 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
SOX11P35716 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX11P35716 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX11P35716 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX11P35716 AL645929.1-201ENST00000420084 975 ntBASIC17.25■□□□□ 0.35
SOX11P35716 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.25■□□□□ 0.35
SOX11P35716 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX11P35716 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.25■□□□□ 0.35
SOX11P35716 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.25■□□□□ 0.35
SOX11P35716 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SOX11P35716 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX11P35716 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.25■□□□□ 0.35
SOX11P35716 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SOX11P35716 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX11P35716 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SOX11P35716 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX11P35716 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX11P35716 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
SOX11P35716 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX11P35716 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX11P35716 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SOX11P35716 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SOX11P35716 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX11P35716 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX11P35716 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SOX11P35716 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SOX11P35716 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SOX11P35716 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
SOX11P35716 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SOX11P35716 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SOX11P35716 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SOX11P35716 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SOX11P35716 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX11P35716 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX11P35716 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX11P35716 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.24■□□□□ 0.35
SOX11P35716 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SOX11P35716 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.24■□□□□ 0.35
SOX11P35716 KRT18P48-201ENST00000434763 852 ntBASIC17.24■□□□□ 0.35
SOX11P35716 HCG4P8-203ENST00000443049 980 ntBASIC17.24■□□□□ 0.35
SOX11P35716 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.24■□□□□ 0.35
SOX11P35716 KRT18P41-201ENST00000518924 1277 ntBASIC17.24■□□□□ 0.35
SOX11P35716 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SOX11P35716 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX11P35716 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX11P35716 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX11P35716 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX11P35716 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.24■□□□□ 0.35
SOX11P35716 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX11P35716 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX11P35716 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SOX11P35716 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX11P35716 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms