Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT9P35527 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT9P35527 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT9P35527 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
KRT9P35527 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT9P35527 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT9P35527 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT9P35527 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
KRT9P35527 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.29■□□□□ 0.68
KRT9P35527 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT9P35527 AC104076.2-201ENST00000448912 469 ntBASIC19.29■□□□□ 0.68
KRT9P35527 AC092647.4-201ENST00000457211 535 ntBASIC19.29■□□□□ 0.68
KRT9P35527 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.29■□□□□ 0.68
KRT9P35527 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT9P35527 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
KRT9P35527 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
KRT9P35527 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT9P35527 KRT8P47-201ENST00000604727 1398 ntBASIC19.29■□□□□ 0.68
KRT9P35527 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT9P35527 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
KRT9P35527 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT9P35527 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT9P35527 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT9P35527 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT9P35527 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT9P35527 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT9P35527 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT9P35527 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT9P35527 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
KRT9P35527 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT9P35527 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT9P35527 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
KRT9P35527 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.28■□□□□ 0.68
KRT9P35527 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT9P35527 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
KRT9P35527 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT9P35527 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT9P35527 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT9P35527 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT9P35527 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
KRT9P35527 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT9P35527 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT9P35527 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT9P35527 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT9P35527 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT9P35527 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT9P35527 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT9P35527 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT9P35527 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT9P35527 TNRC18P3-201ENST00000441896 2691 ntBASIC19.27■□□□□ 0.68
KRT9P35527 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT9P35527 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT9P35527 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT9P35527 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.27■□□□□ 0.68
KRT9P35527 RCN1P1-201ENST00000400413 996 ntBASIC19.27■□□□□ 0.68
KRT9P35527 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT9P35527 AL359075.1-203ENST00000462729 1002 ntBASIC19.27■□□□□ 0.68
KRT9P35527 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.27■□□□□ 0.68
KRT9P35527 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
KRT9P35527 RN7SL850P-201ENST00000579959 291 ntBASIC19.27■□□□□ 0.68
KRT9P35527 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.27■□□□□ 0.68
KRT9P35527 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT9P35527 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.27■□□□□ 0.68
KRT9P35527 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT9P35527 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT9P35527 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.27■□□□□ 0.67
KRT9P35527 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT9P35527 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.67
KRT9P35527 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
KRT9P35527 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
KRT9P35527 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT9P35527 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT9P35527 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT9P35527 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT9P35527 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT9P35527 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KRT9P35527 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT9P35527 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT9P35527 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT9P35527 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT9P35527 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT9P35527 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT9P35527 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms