Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LCN1P31025 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.32■□□□□ 0.2
LCN1P31025 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.32■□□□□ 0.2
LCN1P31025 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.32■□□□□ 0.2
LCN1P31025 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.32■□□□□ 0.2
LCN1P31025 ATP5G2P1-201ENST00000433580 426 ntBASIC16.32■□□□□ 0.2
LCN1P31025 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.32■□□□□ 0.2
LCN1P31025 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 HLA-J-201ENST00000462773 1622 ntBASIC16.32■□□□□ 0.2
LCN1P31025 AC002558.1-201ENST00000488906 803 ntBASIC16.32■□□□□ 0.2
LCN1P31025 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.32■□□□□ 0.2
LCN1P31025 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.32■□□□□ 0.2
LCN1P31025 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.32■□□□□ 0.2
LCN1P31025 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.32■□□□□ 0.2
LCN1P31025 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
LCN1P31025 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.32■□□□□ 0.2
LCN1P31025 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LCN1P31025 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
LCN1P31025 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.32■□□□□ 0.2
LCN1P31025 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.32■□□□□ 0.2
LCN1P31025 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.32■□□□□ 0.2
LCN1P31025 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.32■□□□□ 0.2
LCN1P31025 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
LCN1P31025 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P31025 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.31■□□□□ 0.2
LCN1P31025 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LCN1P31025 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.31■□□□□ 0.2
LCN1P31025 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LCN1P31025 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.31■□□□□ 0.2
LCN1P31025 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.31■□□□□ 0.2
LCN1P31025 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.31■□□□□ 0.2
LCN1P31025 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LCN1P31025 AC233702.3-201ENST00000578656 1387 ntBASIC16.31■□□□□ 0.2
LCN1P31025 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.31■□□□□ 0.2
LCN1P31025 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 TNRC18P3-201ENST00000441896 2691 ntBASIC16.31■□□□□ 0.2
LCN1P31025 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.31■□□□□ 0.2
LCN1P31025 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.31■□□□□ 0.2
LCN1P31025 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.31■□□□□ 0.2
LCN1P31025 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.31■□□□□ 0.2
LCN1P31025 FAM220CP-201ENST00000395253 831 ntBASIC16.31■□□□□ 0.2
LCN1P31025 AP002383.4-201ENST00000442518 975 ntBASIC16.31■□□□□ 0.2
LCN1P31025 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.31■□□□□ 0.2
LCN1P31025 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.31■□□□□ 0.2
LCN1P31025 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LCN1P31025 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.31■□□□□ 0.2
LCN1P31025 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.31■□□□□ 0.2
LCN1P31025 TPSP2-201ENST00000561760 610 ntBASIC16.31■□□□□ 0.2
LCN1P31025 AC005336.2-201ENST00000593183 939 ntBASIC16.31■□□□□ 0.2
LCN1P31025 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LCN1P31025 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.31■□□□□ 0.2
LCN1P31025 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LCN1P31025 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.31■□□□□ 0.2
LCN1P31025 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
LCN1P31025 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P31025 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P31025 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.3■□□□□ 0.2
LCN1P31025 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LCN1P31025 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P31025 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P31025 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P31025 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P31025 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P31025 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms