Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.36■□□□□ 0.85
ERCC3P19447 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
ERCC3P19447 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
ERCC3P19447 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC3P19447 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC3P19447 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC3P19447 BICD1-207ENST00000551848 1962 ntBASIC20.36■□□□□ 0.85
ERCC3P19447 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC3P19447 AC093010.1-201ENST00000473625 1624 ntBASIC20.36■□□□□ 0.85
ERCC3P19447 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC3P19447 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ERCC3P19447 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ERCC3P19447 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.36■□□□□ 0.85
ERCC3P19447 YBX2P1-201ENST00000394192 760 ntBASIC20.36■□□□□ 0.85
ERCC3P19447 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.36■□□□□ 0.85
ERCC3P19447 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.36■□□□□ 0.85
ERCC3P19447 KRT18P27-201ENST00000427733 1299 ntBASIC20.36■□□□□ 0.85
ERCC3P19447 GPX1P2-201ENST00000429271 606 ntBASIC20.36■□□□□ 0.85
ERCC3P19447 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.36■□□□□ 0.85
ERCC3P19447 AC040169.1-201ENST00000565382 521 ntBASIC20.36■□□□□ 0.85
ERCC3P19447 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.36■□□□□ 0.85
ERCC3P19447 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC3P19447 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC3P19447 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC3P19447 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.36■□□□□ 0.85
ERCC3P19447 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.36■□□□□ 0.85
ERCC3P19447 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.36■□□□□ 0.85
ERCC3P19447 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC3P19447 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ERCC3P19447 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC3P19447 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.35■□□□□ 0.85
ERCC3P19447 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ERCC3P19447 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
ERCC3P19447 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ERCC3P19447 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.35■□□□□ 0.85
ERCC3P19447 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.35■□□□□ 0.85
ERCC3P19447 RNA5SP416-201ENST00000516838 111 ntBASIC20.35■□□□□ 0.85
ERCC3P19447 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC3P19447 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.35■□□□□ 0.85
ERCC3P19447 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC3P19447 AC020916.1-201ENST00000587762 1774 ntBASIC20.35■□□□□ 0.85
ERCC3P19447 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC3P19447 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC3P19447 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC3P19447 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.35■□□□□ 0.85
ERCC3P19447 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC3P19447 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.35■□□□□ 0.85
ERCC3P19447 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ERCC3P19447 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC3P19447 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.35■□□□□ 0.85
ERCC3P19447 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC3P19447 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC3P19447 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC3P19447 HCG11-201ENST00000411553 5696 ntBASIC20.34■□□□□ 0.85
ERCC3P19447 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ERCC3P19447 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC3P19447 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC3P19447 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC3P19447 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 SPDYE21P-201ENST00000413323 827 ntBASIC20.34■□□□□ 0.85
ERCC3P19447 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.34■□□□□ 0.85
ERCC3P19447 PRYP5-201ENST00000451909 266 ntBASIC20.34■□□□□ 0.85
ERCC3P19447 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.34■□□□□ 0.85
ERCC3P19447 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ERCC3P19447 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC3P19447 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.34■□□□□ 0.85
ERCC3P19447 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ERCC3P19447 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.34■□□□□ 0.85
ERCC3P19447 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ERCC3P19447 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ERCC3P19447 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC3P19447 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
ERCC3P19447 AC073592.3-201ENST00000625118 1834 ntBASIC20.34■□□□□ 0.85
ERCC3P19447 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC3P19447 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC3P19447 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.33■□□□□ 0.85
ERCC3P19447 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC3P19447 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.33■□□□□ 0.85
ERCC3P19447 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.33■□□□□ 0.85
ERCC3P19447 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC3P19447 AC073621.1-201ENST00000392730 636 ntBASIC20.33■□□□□ 0.85
ERCC3P19447 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.33■□□□□ 0.85
ERCC3P19447 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.33■□□□□ 0.85
ERCC3P19447 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms