Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.48■□□□□ 0.71
SMPD1P17405 AC027612.4-201ENST00000605371 583 ntBASIC19.48■□□□□ 0.71
SMPD1P17405 AC007064.4-201ENST00000637740 555 ntBASIC19.48■□□□□ 0.71
SMPD1P17405 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD1P17405 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
SMPD1P17405 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD1P17405 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD1P17405 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD1P17405 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD1P17405 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD1P17405 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SMPD1P17405 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD1P17405 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SMPD1P17405 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.47■□□□□ 0.71
SMPD1P17405 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SMPD1P17405 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.47■□□□□ 0.71
SMPD1P17405 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.47■□□□□ 0.71
SMPD1P17405 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.47■□□□□ 0.71
SMPD1P17405 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD1P17405 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.47■□□□□ 0.71
SMPD1P17405 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD1P17405 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD1P17405 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD1P17405 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.47■□□□□ 0.71
SMPD1P17405 CXCL1P1-201ENST00000502804 216 ntBASIC19.47■□□□□ 0.71
SMPD1P17405 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD1P17405 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.47■□□□□ 0.71
SMPD1P17405 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
SMPD1P17405 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD1P17405 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.47■□□□□ 0.71
SMPD1P17405 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.47■□□□□ 0.71
SMPD1P17405 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD1P17405 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD1P17405 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SMPD1P17405 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SMPD1P17405 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.47■□□□□ 0.71
SMPD1P17405 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD1P17405 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.47■□□□□ 0.71
SMPD1P17405 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD1P17405 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.46■□□□□ 0.71
SMPD1P17405 FLJ13224-201ENST00000313737 1514 ntBASIC19.46■□□□□ 0.71
SMPD1P17405 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD1P17405 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD1P17405 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD1P17405 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SMPD1P17405 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SMPD1P17405 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.46■□□□□ 0.71
SMPD1P17405 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD1P17405 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.46■□□□□ 0.71
SMPD1P17405 AL645939.2-201ENST00000427340 991 ntBASIC19.46■□□□□ 0.71
SMPD1P17405 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.46■□□□□ 0.71
SMPD1P17405 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.46■□□□□ 0.71
SMPD1P17405 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SMPD1P17405 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD1P17405 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.46■□□□□ 0.71
SMPD1P17405 AC091812.2-201ENST00000619081 385 ntBASIC19.46■□□□□ 0.71
SMPD1P17405 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
SMPD1P17405 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD1P17405 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.46■□□□□ 0.71
SMPD1P17405 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD1P17405 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SMPD1P17405 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.46■□□□□ 0.71
SMPD1P17405 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.46■□□□□ 0.71
SMPD1P17405 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD1P17405 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD1P17405 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SMPD1P17405 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD1P17405 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD1P17405 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
SMPD1P17405 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMPD1P17405 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
SMPD1P17405 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMPD1P17405 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.45■□□□□ 0.7
SMPD1P17405 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMPD1P17405 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMPD1P17405 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMPD1P17405 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.45■□□□□ 0.7
SMPD1P17405 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMPD1P17405 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMPD1P17405 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMPD1P17405 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMPD1P17405 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMPD1P17405 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMPD1P17405 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.45■□□□□ 0.7
SMPD1P17405 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SMPD1P17405 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SMPD1P17405 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.45■□□□□ 0.7
SMPD1P17405 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.45■□□□□ 0.7
SMPD1P17405 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.45■□□□□ 0.7
SMPD1P17405 AC092902.6-201ENST00000641783 218 ntBASIC19.45■□□□□ 0.7
SMPD1P17405 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.45■□□□□ 0.7
SMPD1P17405 AL135999.2-201ENST00000622438 1686 ntBASIC19.45■□□□□ 0.7
SMPD1P17405 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMPD1P17405 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SMPD1P17405 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.45■□□□□ 0.7
SMPD1P17405 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.45■□□□□ 0.7
SMPD1P17405 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SMPD1P17405 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.45■□□□□ 0.7
SMPD1P17405 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.45■□□□□ 0.7
SMPD1P17405 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms