Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.96□□□□□ -0.01
HIST1H1DP16402 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HIST1H1DP16402 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H1DP16402 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
HIST1H1DP16402 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
HIST1H1DP16402 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
HIST1H1DP16402 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H1DP16402 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H1DP16402 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H1DP16402 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.96□□□□□ -0.01
HIST1H1DP16402 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H1DP16402 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
HIST1H1DP16402 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
HIST1H1DP16402 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.96□□□□□ -0.02
HIST1H1DP16402 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HIST1H1DP16402 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HIST1H1DP16402 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HIST1H1DP16402 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.96□□□□□ -0.02
HIST1H1DP16402 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
HIST1H1DP16402 AC018695.7-201ENST00000624587 2492 ntBASIC14.95□□□□□ -0.02
HIST1H1DP16402 KRT89P-201ENST00000620027 1478 ntBASIC14.95□□□□□ -0.02
HIST1H1DP16402 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 PCDHB19P-201ENST00000570871 2371 ntBASIC14.95□□□□□ -0.02
HIST1H1DP16402 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 INGX-201ENST00000359239 846 ntBASIC14.95□□□□□ -0.02
HIST1H1DP16402 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.95□□□□□ -0.02
HIST1H1DP16402 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.95□□□□□ -0.02
HIST1H1DP16402 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1DP16402 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 AP000523.1-201ENST00000398242 1049 ntBASIC14.94□□□□□ -0.02
HIST1H1DP16402 TSPY7P-201ENST00000431358 1114 ntBASIC14.94□□□□□ -0.02
HIST1H1DP16402 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms