Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRT3P12035 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT3P12035 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.57■□□□□ 0.56
KRT3P12035 AC007967.3-201ENST00000434308 558 ntBASIC18.57■□□□□ 0.56
KRT3P12035 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.57■□□□□ 0.56
KRT3P12035 VENTXP7-201ENST00000475503 772 ntBASIC18.57■□□□□ 0.56
KRT3P12035 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.57■□□□□ 0.56
KRT3P12035 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.57■□□□□ 0.56
KRT3P12035 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.57■□□□□ 0.56
KRT3P12035 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.57■□□□□ 0.56
KRT3P12035 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT3P12035 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRT3P12035 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.57■□□□□ 0.56
KRT3P12035 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
KRT3P12035 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT3P12035 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT3P12035 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.57■□□□□ 0.56
KRT3P12035 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.57■□□□□ 0.56
KRT3P12035 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT3P12035 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
KRT3P12035 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.56■□□□□ 0.56
KRT3P12035 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
KRT3P12035 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
KRT3P12035 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.56■□□□□ 0.56
KRT3P12035 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.56■□□□□ 0.56
KRT3P12035 AP002383.4-201ENST00000442518 975 ntBASIC18.56■□□□□ 0.56
KRT3P12035 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
KRT3P12035 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.56■□□□□ 0.56
KRT3P12035 AC091076.1-201ENST00000610741 619 ntBASIC18.56■□□□□ 0.56
KRT3P12035 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.56■□□□□ 0.56
KRT3P12035 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.56■□□□□ 0.56
KRT3P12035 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.56■□□□□ 0.56
KRT3P12035 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.56■□□□□ 0.56
KRT3P12035 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.56■□□□□ 0.56
KRT3P12035 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
KRT3P12035 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT3P12035 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
KRT3P12035 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT3P12035 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.55■□□□□ 0.56
KRT3P12035 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT3P12035 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
KRT3P12035 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
KRT3P12035 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
KRT3P12035 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.55■□□□□ 0.56
KRT3P12035 DRAXINP1-201ENST00000437611 948 ntBASIC18.55■□□□□ 0.56
KRT3P12035 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 AC091607.1-201ENST00000490318 1060 ntBASIC18.55■□□□□ 0.56
KRT3P12035 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT3P12035 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT3P12035 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.55■□□□□ 0.56
KRT3P12035 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.55■□□□□ 0.56
KRT3P12035 AP002414.4-201ENST00000589764 1148 ntBASIC18.55■□□□□ 0.56
KRT3P12035 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
KRT3P12035 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
KRT3P12035 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT3P12035 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
KRT3P12035 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT3P12035 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT3P12035 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.54■□□□□ 0.56
KRT3P12035 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT3P12035 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.54■□□□□ 0.56
KRT3P12035 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT3P12035 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT3P12035 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KRT3P12035 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT3P12035 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
KRT3P12035 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms