Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.21■□□□□ 0.35
PCNAP12004 Z83836.1-201ENST00000624605 1642 ntBASIC17.21■□□□□ 0.35
PCNAP12004 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PCNAP12004 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCNAP12004 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
PCNAP12004 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.2■□□□□ 0.34
PCNAP12004 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.2■□□□□ 0.34
PCNAP12004 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCNAP12004 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PCNAP12004 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCNAP12004 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCNAP12004 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCNAP12004 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.2■□□□□ 0.34
PCNAP12004 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.2■□□□□ 0.34
PCNAP12004 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCNAP12004 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCNAP12004 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCNAP12004 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCNAP12004 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCNAP12004 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCNAP12004 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCNAP12004 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.2■□□□□ 0.34
PCNAP12004 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.2■□□□□ 0.34
PCNAP12004 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
PCNAP12004 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.2■□□□□ 0.34
PCNAP12004 SPDYE13P-201ENST00000445314 798 ntBASIC17.2■□□□□ 0.34
PCNAP12004 RNF126P1-202ENST00000569893 925 ntBASIC17.2■□□□□ 0.34
PCNAP12004 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.2■□□□□ 0.34
PCNAP12004 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCNAP12004 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCNAP12004 AC141586.5-201ENST00000624546 2050 ntBASIC17.2■□□□□ 0.34
PCNAP12004 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.2■□□□□ 0.34
PCNAP12004 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCNAP12004 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PCNAP12004 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCNAP12004 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCNAP12004 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.2■□□□□ 0.34
PCNAP12004 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCNAP12004 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 AC009949.1-201ENST00000623048 1830 ntBASIC17.19■□□□□ 0.34
PCNAP12004 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.19■□□□□ 0.34
PCNAP12004 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
PCNAP12004 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 AL645929.1-201ENST00000420084 975 ntBASIC17.19■□□□□ 0.34
PCNAP12004 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.19■□□□□ 0.34
PCNAP12004 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.19■□□□□ 0.34
PCNAP12004 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.19■□□□□ 0.34
PCNAP12004 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.19■□□□□ 0.34
PCNAP12004 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.19■□□□□ 0.34
PCNAP12004 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCNAP12004 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 KRT8P47-201ENST00000604727 1398 ntBASIC17.18■□□□□ 0.34
PCNAP12004 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.18■□□□□ 0.34
PCNAP12004 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCNAP12004 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.18■□□□□ 0.34
PCNAP12004 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.18■□□□□ 0.34
PCNAP12004 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.18■□□□□ 0.34
PCNAP12004 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.18■□□□□ 0.34
PCNAP12004 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 AC112698.1-201ENST00000510299 916 ntBASIC17.18■□□□□ 0.34
PCNAP12004 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.18■□□□□ 0.34
PCNAP12004 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.18■□□□□ 0.34
PCNAP12004 AL390719.2-201ENST00000606993 987 ntBASIC17.18■□□□□ 0.34
PCNAP12004 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.18■□□□□ 0.34
PCNAP12004 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.18■□□□□ 0.34
PCNAP12004 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
PCNAP12004 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PCNAP12004 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.18■□□□□ 0.34
PCNAP12004 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.18■□□□□ 0.34
PCNAP12004 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PCNAP12004 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCNAP12004 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms