Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 BX276092.7-203ENST00000637198 1536 ntBASIC20.69■□□□□ 0.9
TOP1P11387 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
TOP1P11387 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TOP1P11387 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP1P11387 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.69■□□□□ 0.9
TOP1P11387 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
TOP1P11387 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.69■□□□□ 0.9
TOP1P11387 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.69■□□□□ 0.9
TOP1P11387 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.69■□□□□ 0.9
TOP1P11387 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.69■□□□□ 0.9
TOP1P11387 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.69■□□□□ 0.9
TOP1P11387 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.69■□□□□ 0.9
TOP1P11387 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.69■□□□□ 0.9
TOP1P11387 AD001527.2-201ENST00000622994 785 ntBASIC20.69■□□□□ 0.9
TOP1P11387 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.69■□□□□ 0.9
TOP1P11387 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP1P11387 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP1P11387 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TOP1P11387 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.69■□□□□ 0.9
TOP1P11387 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP1P11387 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP1P11387 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP1P11387 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.69■□□□□ 0.9
TOP1P11387 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP1P11387 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP1P11387 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP1P11387 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TOP1P11387 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.69■□□□□ 0.9
TOP1P11387 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TOP1P11387 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.68■□□□□ 0.9
TOP1P11387 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TOP1P11387 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TOP1P11387 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.68■□□□□ 0.9
TOP1P11387 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.68■□□□□ 0.9
TOP1P11387 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP1P11387 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP1P11387 AC020916.1-201ENST00000587762 1774 ntBASIC20.68■□□□□ 0.9
TOP1P11387 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP1P11387 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP1P11387 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP1P11387 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.68■□□□□ 0.9
TOP1P11387 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.68■□□□□ 0.9
TOP1P11387 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.68■□□□□ 0.9
TOP1P11387 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TOP1P11387 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TOP1P11387 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TOP1P11387 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TOP1P11387 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TOP1P11387 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP1P11387 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP1P11387 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP1P11387 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.68■□□□□ 0.9
TOP1P11387 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.68■□□□□ 0.9
TOP1P11387 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TOP1P11387 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.68■□□□□ 0.9
TOP1P11387 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TOP1P11387 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.68■□□□□ 0.9
TOP1P11387 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.68■□□□□ 0.9
TOP1P11387 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.68■□□□□ 0.9
TOP1P11387 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TOP1P11387 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TOP1P11387 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TOP1P11387 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TOP1P11387 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TOP1P11387 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
TOP1P11387 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.67■□□□□ 0.9
TOP1P11387 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TOP1P11387 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.67■□□□□ 0.9
TOP1P11387 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TOP1P11387 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TOP1P11387 AC008764.6-201ENST00000595909 2069 ntBASIC20.67■□□□□ 0.9
TOP1P11387 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.67■□□□□ 0.9
TOP1P11387 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.67■□□□□ 0.9
TOP1P11387 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TOP1P11387 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TOP1P11387 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TOP1P11387 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.67■□□□□ 0.9
TOP1P11387 SLC25A6P4-201ENST00000586535 553 ntBASIC20.67■□□□□ 0.9
TOP1P11387 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.67■□□□□ 0.9
TOP1P11387 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TOP1P11387 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.67■□□□□ 0.9
TOP1P11387 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TOP1P11387 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TOP1P11387 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TOP1P11387 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TOP1P11387 PMPCAP1-201ENST00000508114 1576 ntBASIC20.67■□□□□ 0.9
TOP1P11387 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.67■□□□□ 0.9
TOP1P11387 SIRPAP1-201ENST00000448467 1770 ntBASIC20.67■□□□□ 0.9
TOP1P11387 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TOP1P11387 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TOP1P11387 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.66■□□□□ 0.9
TOP1P11387 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TOP1P11387 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
TOP1P11387 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TOP1P11387 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TOP1P11387 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TOP1P11387 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
TOP1P11387 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TOP1P11387 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.66■□□□□ 0.9
TOP1P11387 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms