Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.56■□□□□ 0.4
COL4A2P08572 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL4A2P08572 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
COL4A2P08572 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL4A2P08572 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
COL4A2P08572 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.55■□□□□ 0.4
COL4A2P08572 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
COL4A2P08572 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.55■□□□□ 0.4
COL4A2P08572 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.55■□□□□ 0.4
COL4A2P08572 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.55■□□□□ 0.4
COL4A2P08572 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.55■□□□□ 0.4
COL4A2P08572 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.55■□□□□ 0.4
COL4A2P08572 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL4A2P08572 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL4A2P08572 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.55■□□□□ 0.4
COL4A2P08572 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.55■□□□□ 0.4
COL4A2P08572 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.55■□□□□ 0.4
COL4A2P08572 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL4A2P08572 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL4A2P08572 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL4A2P08572 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.55■□□□□ 0.4
COL4A2P08572 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL4A2P08572 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.55■□□□□ 0.4
COL4A2P08572 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL4A2P08572 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
COL4A2P08572 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL4A2P08572 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.55■□□□□ 0.4
COL4A2P08572 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL4A2P08572 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL4A2P08572 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
COL4A2P08572 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.55■□□□□ 0.4
COL4A2P08572 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
COL4A2P08572 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.55■□□□□ 0.4
COL4A2P08572 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.55■□□□□ 0.4
COL4A2P08572 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.55■□□□□ 0.4
COL4A2P08572 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.55■□□□□ 0.4
COL4A2P08572 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.55■□□□□ 0.4
COL4A2P08572 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
COL4A2P08572 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL4A2P08572 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.54■□□□□ 0.4
COL4A2P08572 KRT18P55-202ENST00000578578 1546 ntBASIC17.54■□□□□ 0.4
COL4A2P08572 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A2P08572 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A2P08572 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A2P08572 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A2P08572 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A2P08572 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A2P08572 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A2P08572 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A2P08572 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A2P08572 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A2P08572 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A2P08572 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.54■□□□□ 0.4
COL4A2P08572 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A2P08572 PMS2P4-201ENST00000412466 1052 ntBASIC17.54■□□□□ 0.4
COL4A2P08572 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.54■□□□□ 0.4
COL4A2P08572 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.54■□□□□ 0.4
COL4A2P08572 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.54■□□□□ 0.4
COL4A2P08572 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.54■□□□□ 0.4
COL4A2P08572 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.54■□□□□ 0.4
COL4A2P08572 AC138761.1-201ENST00000584393 385 ntBASIC17.54■□□□□ 0.4
COL4A2P08572 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.54■□□□□ 0.4
COL4A2P08572 AC239800.4-201ENST00000603712 296 ntBASIC17.54■□□□□ 0.4
COL4A2P08572 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COL4A2P08572 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.54■□□□□ 0.4
COL4A2P08572 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A2P08572 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.54■□□□□ 0.4
COL4A2P08572 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
COL4A2P08572 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.54■□□□□ 0.4
COL4A2P08572 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.54■□□□□ 0.4
COL4A2P08572 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A2P08572 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A2P08572 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.53■□□□□ 0.4
COL4A2P08572 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A2P08572 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A2P08572 FAM185BP-201ENST00000443595 716 ntBASIC17.53■□□□□ 0.4
COL4A2P08572 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.53■□□□□ 0.4
COL4A2P08572 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A2P08572 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.53■□□□□ 0.4
COL4A2P08572 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.53■□□□□ 0.4
COL4A2P08572 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.53■□□□□ 0.4
COL4A2P08572 REXO1L9P-201ENST00000604264 2108 ntBASIC17.53■□□□□ 0.4
COL4A2P08572 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A2P08572 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A2P08572 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A2P08572 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.53■□□□□ 0.4
COL4A2P08572 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.53■□□□□ 0.4
COL4A2P08572 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
COL4A2P08572 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A2P08572 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A2P08572 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A2P08572 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.53■□□□□ 0.4
COL4A2P08572 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.53■□□□□ 0.4
COL4A2P08572 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A2P08572 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.52■□□□□ 0.4
COL4A2P08572 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A2P08572 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A2P08572 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A2P08572 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A2P08572 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms